| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1510380 | 85 (0.960) | 7 (0.080) | 7/230 | NT | 7.8% | pseudogene (1229/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | = 1510388 | 87 (1.050) | pseudogene (1221/1851 nt) | PP_1325 | putative lipoprotein | |||||
GCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1510224‑1510380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcctggcCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACGGTG < NC_002947/1510388‑1510241 GCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAG < 1:131395/150‑1 AGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTC > 2:2216417/1‑150 GCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCC > 2:2116686/1‑150 GCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGAGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCC > 1:1234212/1‑150 GATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTG > 1:1457013/1‑150 GATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTG < 1:1714310/150‑1 ATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGG < 1:2312171/150‑1 ATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGG < 2:1670544/150‑1 GCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCCGCCTTCCGCCAGGACTGGGA < 2:2217735/150‑1 GCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCCGCCTTCCGCCA > 1:1117103/1‑113 GCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCCGCCTTCCGCCA < 2:1117103/113‑1 TTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCCGCCTTCCGCCAGGACTGGG < 1:1116862/98‑1 TTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCCGCCTTCCGCCAGGACTGGG > 2:1116862/1‑98 GGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGCCGCCTTCCGCCAGGACTGGGAAGG > 2:834727/1‑95 CCTTCCCAGTCCTGGCGGAAGGCGGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCC > 1:834727/1‑95 CTGGCCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACG < 2:409430/150‑1 TGGCCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACG < 1:466924/149‑1 TGGCCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACG > 2:466924/1‑149 TGGCCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAG > 1:351041/1‑123 TGGCCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAG < 2:351041/123‑1 GGCCGCCTTCCGCCAGGACTGGGAAGGCAAGGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCGGCAAAGCACGGT < 2:102985/150‑1 GCCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACGGTG < 1:1080467/150‑1 GCCGCATTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCACCTCCGGTTTCTCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACGGTG < 2:2143138/150‑1 GCAGCGATGCTGCCGCCCACCGTGCTTTGCAGGCTCTTGGCGCGGCCTTCGCTCTGGCGCAGCTGGAACAGGTCGGCAATTTGCTGGGCCAGGGCGACCGGCTGGGCGATGCGCTCGGCGGCGAGCAGGGTTCCGCCATTGCCTTCCCAGTCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1510224‑1510380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcctggcCGCCTTCCGCCAGGACTGGGAAGGCAATGGCGGAACCCTGCTCGCCGCCGAGCGCATCGCCCAGCCGGTCGCCCTGGCCCAGCAAATTGCCGACCTGTTCCAGCTGCGCCAGAGCGAAGGCCGCGCCAAGAGCCTGCAAAGCACGGTG < NC_002947/1510388‑1510241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |