| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1541617 = | 110 (1.240) | 7 (0.090) | 7/228 | NT | 6.7% | intergenic (‑51/‑50) | panE/PP_1352 | 2‑dehydropantoate 2‑reductase/hypothetical protein |
| ? | NC_002947 | 1541647 = | 93 (1.130) | intergenic (‑81/‑20) | panE/PP_1352 | 2‑dehydropantoate 2‑reductase/hypothetical protein | |||||
CCTTTGCCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1541773‑1541617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcgctTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACAAA > NC_002947/1541647‑1541795 CCTTTGCCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGA < 2:1660904/150‑1 CTTTGCCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAG < 2:437974/150‑1 TTTGCCCTTGAGGTCGTAGCGGCGGTCCAGGTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGC > 1:2246983/1‑150 CCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT > 2:317884/1‑150 CCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT > 2:1575364/1‑150 GATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTT < 1:1925415/150‑1 CACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAG > 1:1533667/1‑89 CACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAG < 2:1533667/89‑1 CCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTAC > 1:2096396/1‑150 AAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGAC < 1:1370862/118‑1 AAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGAC > 2:1370862/1‑118 AAGCGCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAG > 2:240853/1‑150 GCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGC < 1:1115300/134‑1 GCGCTCAGGCTGAAGATGGAGCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGC > 2:1115300/1‑134 GCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAATGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAG < 2:1207698/150‑1 GCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAG < 1:1786113/150‑1 GCGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAG < 1:1710635/150‑1 CGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGG < 2:1029522/150‑1 CGCGCTTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGG < 1:1573496/150‑1 TTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGGCAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACAAA > 1:376937/1‑150 TTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACAAA > 1:839734/1‑150 TTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAA < 2:900140/126‑1 TTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGGCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAA > 1:900140/1‑126 CCTTTGCCCTTGAGGTCGTAGCGGCGGTCCAGTTCCTTGATGGCGTTGTCGACCGCGTTCTGCACTTCGTGCTTGTCCAGTTCCGATACCACGTCGAACGAAGGCATGGTTGTTCTCCCAAAATAAAAGCGCGCTCAGGCTGAAGATGGAGCGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1541773‑1541617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcgctTTTATTTTGGGAGAACAACCATGCCTTCGTTCGACGTGGTATCGGAACTGGACAAGCACGAAGTGCAGAACGCGGTCGACAACGCCATCAAGGAACTGGACCGCCGCTACGACCTCAAGGGCAAAGGCACCTTCGAGTTCAAGGACAAA > NC_002947/1541647‑1541795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |