| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1595834 | 88 (0.990) | 8 (0.090) | 8/244 | NT | 8.0% | coding (1219/1335 nt) | dctD‑III | C4‑dicarboxylate transport transcriptional regulator |
| ? | NC_002947 | = 1595861 | 96 (1.090) | coding (1192/1335 nt) | dctD‑III | C4‑dicarboxylate transport transcriptional regulator | |||||
TTTCCGCTCATGCCTGCCCAATAAAATCCTCGCGCACCAGCCCATGCCGTTGCATCTTCTCGTTAAGCGTGCGCCGAGGCAGTTGCAAGGCCTCCATCACCGACTTGATCTCGCCCCCATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1595711‑1595834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGCGCAATGCCTGCGTGC‑GGCCTTGCGTCAGCATGGGGGCGAGATCAAGTCGGTGATGGAGGCCTTGCAACTGCCTCGGCGCACGCTTAACGAGAAGATGCAACGGCATGGGCTGGTGC < NC_002947/1595861‑1595744 TTTCCGCTCATGCCTGCCCAATAAAATNCTCGCGCACCAGNCCATGCNGTTGCATCTTCTCGTTAAGCGTGCGCCGAGGCAGTTGCAAGGCCTCCATCACCGACTTGATCTCGCCCCCATGCTGACGCAATGCCTGCGTTC‑GGCCTTGCG > 1:2294937/1‑150 TCCGCTCATGCCTGCCCAATAAAATCCTCGCGCACCAGCCCATGCCGTTGCATCTTCTCGTTAAGCGTGCGCCGAGGCAGTTGCAAGGCCTCCATCACCGACTTGATCTCGCCCCCATGCTGACGCAATGCCTGCGTGC‑GGCCTTGCGTC < 2:2294937/150‑1 AGCCCATGCCGTTGCATCTTCTCGTTAAGCGTGCGCCGAGGCAGTTGCAAGGCCTCCATCACCGACTTGATCTCGCCCCCATGCTGACGCAATGCCTGCGTGC‑GGCCTTGCGTCA < 1:814129/115‑1 AGCCCATGCCGTTGCATCTTCTCGTTAAGCGTGCGCCGAGGCAGTTGCAAGGCCTCCATCACCGACTTGATCTCGCCCCCATGCTGACGCAATGCCTGCGTGC‑GGCCTTGCGTCA > 2:814129/1‑115 GACTTGATCTCGCCCCCATGCTGGCGCAATGCCTGCGTGC‑GGCCTTGCGTCAGCATGGGGGCGAGATCAAGTCGGTGATGGAGGCCTTGCAACTGC > 1:235387/1‑96 GACTTGATCTCGCCCCCATGCTGGCGCAATGCCTGCGTGC‑GGCCTTGCGTCAGCATGGGGGCGAGATCAAGTCGGTGATGGAGGCCTTGCAACTGC < 2:235387/96‑1 TCGCCCCCATGCTGACGCAAGGCC‑GCACGCAGGCATTGCGCCAGCATGGGGGCGAGATCAAGTCGGTGATGGAGGCCTTGCAACTGCCTCGGCGCACGCTTAACGAGAAGATGCAACGGCATGGGCTGGTGC > 1:771532/1‑132 TCGCCCCCATGCTGACGCAAGGCC‑GCACGCAGGCATTGCGCCAGCATGGGGGCGAGATCAAGTCGGTGATGGAGGCCTTGCAACTGCCTCGGCGCACGCTTAACGAGAAGATGCAACGGCATGGGCTGGTGC < 2:771532/132‑1 TTTCCGCTCATGCCTGCCCAATAAAATCCTCGCGCACCAGCCCATGCCGTTGCATCTTCTCGTTAAGCGTGCGCCGAGGCAGTTGCAAGGCCTCCATCACCGACTTGATCTCGCCCCCATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1595711‑1595834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGCGCAATGCCTGCGTGC‑GGCCTTGCGTCAGCATGGGGGCGAGATCAAGTCGGTGATGGAGGCCTTGCAACTGCCTCGGCGCACGCTTAACGAGAAGATGCAACGGCATGGGCTGGTGC < NC_002947/1595861‑1595744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |