New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1598430 | 88 (0.990) | 5 (0.060) | 4/236 | NT | 5.5% | coding (374/1758 nt) | dctB | C4‑dicarboxylate transport sensor protein |
? | NC_002947 | = 1598457 | 88 (1.040) | coding (347/1758 nt) | dctB | C4‑dicarboxylate transport sensor protein |
AGGAATCGGCCGTGCTCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1598277‑1598430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCAGCTACGTCGGCTCCAACTACGGTTTCCGCCCCTACTTCAAGCAAACCCGCAGCCAGGGCAGTGGCCGCTTCTATGCCGTGGGCGTGACCAGTGGCGTGCCGGGCTACTTCCT < NC_002947/1598457‑1598313 AGGAATCGGCCGTGCTCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTG > 1:850585/1‑150 GAATCGGCCGTGCTCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCT > 2:1808026/1‑150 GAATCGGCCGTGCTCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCT < 2:332707/150‑1 TCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGG < 1:2329238/139‑1 TCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGG > 2:2329238/1‑139 GAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCA‑‑GCCGCCAGCAACTGGCGGCTGCCCAGCA < 1:793670/150‑1 CACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTG < 1:886164/95‑1 CACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTG > 2:886164/1‑95 GCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGCCATTGCCGCCAGCAACTGGCGGCTGCC > 1:1781871/1‑117 GCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGCCATTGCCGCCAGCAACTGGCGGCTGCC < 2:1781871/117‑1 CACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCA < 1:8552/102‑1 CACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCA > 2:8552/1‑102 GCTGGCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCAGCTACGTCGGCTCCAACTACGGTTTCCGCCCCTACTTCAAGCAAACCCGCAGCCAGGGCAGTGGCCGCTTCTATGCCGTGGGCGTGACCAGTGGCGTGCCGGGCTACTTCCT > 1:1072032/1‑150 GCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCAGCTACGTCGGCTCCAACTACGGTTTCCGCCCCTACTTCAAGCAAACCCGCAGCCAGGGCAGTGGCCGCTTCTATGCCGTGGGCGTG < 1:235287/120‑1 GCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCAGCTACGTCGGCTCCAACTACGGTTTCCGCCCCTACTTCAAGCAAACCCGCAGCCAGGGCAGTGGCCGCTTCTATGCCGTGGGCGTG > 2:235287/1‑120 AGGAATCGGCCGTGCTCGTCGTTCACCGCGCTGGCGAGGAAGTAGCCCGGCACGCCACTGGTCACGCCCACGGCATAGAAGCGGCCACTGCCCTGGCTGCGGGTTTGCTTGAAGTAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1598277‑1598430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCCATTGCCGCCAGCAACTGGCGGCTGCCCAGCAGCTACGTCGGCTCCAACTACGGTTTCCGCCCCTACTTCAAGCAAACCCGCAGCCAGGGCAGTGGCCGCTTCTATGCCGTGGGCGTGACCAGTGGCGTGCCGGGCTACTTCCT < NC_002947/1598457‑1598313 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |