| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1612894 = | 104 (1.170) | 6 (0.070) | 4/226 | NT | 6.3% | coding (649/693 nt) | ung | uracil‑DNA glycosylase |
| ? | NC_002947 | 1612936 = | 83 (1.020) | coding (691/693 nt) | ung | uracil‑DNA glycosylase | |||||
CCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1613050‑1612894‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctgTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGG > NC_002947/1612936‑1613079 CCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC > 1:1753745/1‑150 TTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCC > 2:843955/1‑150 GGAGGACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCACCGCTG > 2:667611/1‑150 CATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC > 1:1020718/1‑107 CATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC < 2:1020770/107‑1 CATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC < 2:1020718/107‑1 CATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC > 1:1020770/1‑107 TCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC > 1:2010096/1‑150 TCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC > 1:697644/1‑150 ACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTC > 2:2223768/1‑150 ACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTC > 1:1187714/1‑150 AGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGC < 1:1490318/138‑1 AGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGC > 2:1490318/1‑138 GCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTTCTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTC < 2:282998/150‑1 GCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTC < 2:733855/150‑1 CCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACC > 1:158329/1‑120 CCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACC < 2:158329/120‑1 CCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCAC < 1:1271294/119‑1 CCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCAC > 2:1271294/1‑119 CCCCGCTTTGAGAAACCGAGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAACGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCT < 1:389254/150‑1 CCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGG > 1:1801800/1‑150 CGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTG > 2:969661/1‑70 CGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTG < 1:969661/70‑1 CCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1613050‑1612894‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctgTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGG > NC_002947/1612936‑1613079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |