| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1647282 = | 73 (0.820) | 4 (0.050) | 4/238 | NT | 5.2% | coding (117/2412 nt) | gcd | quinoprotein glucose dehydrogenase |
| ? | NC_002947 | 1647321 = | 75 (0.880) | coding (78/2412 nt) | gcd | quinoprotein glucose dehydrogenase | |||||
TTCTAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1647434‑1647282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGC > NC_002947/1647321‑1647469 TTCTAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTG < 1:2362395/150‑1 TAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC > 2:145387/1‑150 TAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC < 2:181665/150‑1 TGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCC > 1:2371012/1‑140 TGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCC < 2:2371012/140‑1 CTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGG < 1:1486988/149‑1 CTGGCCCTGCTGGCCGGCGGTATCAAGCTGACCCAGCTGGGCCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGG > 2:1486988/1‑149 CCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGC < 1:1056618/150‑1 CCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGC > 1:2004311/1‑150 CCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTC > 1:956581/1‑122 CCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTC < 2:956581/122‑1 TTCTAACCCCTTTTTTGACCTGACGGAGAACCTACGATGAGCACTGAAGGTGCGAACCAAGGAAGCCGCTGGCTACCGCGCCTGATTGGCGCGCTGCTGTTGCTGATGGGCCTGGCCCTGCTGGCCGGCGGTATCAAGCTGAGCCAGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1647434‑1647282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCAGGCCCATCAGCAACAGCAGCGCGCCAATCAGGCGCGGTAGCCAGCGGCTTCCTTGGTTCGCACCTTCAGTGCTCATCGTAGGTTCTCCGTCAGGTCAAAAAAGGGGTTAGAAACTGCTCTGGATCTTCAGGCCGCCGATCAGGGCGC > NC_002947/1647321‑1647469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |