New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1678654 =	70 (0.790)	6 (0.070)	5/228	NT	8.8%	intergenic (+94/+93)	PP_1473/PP_1474	hypothetical protein/hypothetical protein
	?	NC_002947	1678682 =	60 (0.730)					intergenic (+122/+65)	PP_1473/PP_1474	hypothetical protein/hypothetical protein

CTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1678803‑1678654 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATACAACCCTGG  >  NC_002947/1678682‑1678830                                                                                                                                                                                                                                                                                                             CTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG                                                                                                                                                       >  1:846277/1‑150                            GAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGG                                                                                                                                                        >  1:19891/1‑122                            GAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGG                                                                                                                                                        <  2:19891/122‑1                                                                                                  GATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGG                                                                                                                                                         <  1:2007376/51‑1                                                                                                  GATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGG                                                                                                                                                         >  2:2007376/1‑51                                                                                                                 AAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTC                                                                             <  1:1687097/112‑1                                                                                                                 AAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTC                                                                             >  2:1687097/1‑112                                                                                                                            CCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGG                            >  1:2293780/1‑150                                                                                                                            CCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTC                                                                                                                       >  1:1499753/1‑59                                                                                                                            CCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTC                                                                                                                       <  2:1499753/59‑1                                                                                                                             CCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGT                           >  1:455526/1‑150                                                                                                                                                CCCGGGGTTTCTTTTTTCGGCAGGCACGTATTCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTC                                       <  1:544355/119‑1                                                                                                                                                CCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTC                                       >  2:544355/1‑119                                                                                                                                                  CGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATACAACC      >  2:1766238/1‑150                                                                                                                                                      GTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATACAACCCTGG  <  2:1181348/150‑1                                                                                                                                                      GTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATACAACCCTGG  <  2:2202809/150‑1                                                                                                                                                                                                                                                                                                             CTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1678803‑1678654 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATACAACCCTGG  >  NC_002947/1678682‑1678830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.