| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1780597 = | 65 (0.730) | 9 (0.110) | 6/234 | NT | 13.0% | coding (789/1197 nt) | dapC | N‑succinyl‑L,L‑diaminopimelate aminotransferase |
| ? | NC_002947 | 1780635 = | 59 (0.700) | coding (751/1197 nt) | dapC | N‑succinyl‑L,L‑diaminopimelate aminotransferase | |||||
TGTACTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTGTCCAAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1780751‑1780597‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAGTACAGCTCGCTGTA > NC_002947/1780635‑1780761 TGTACTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTGTCCAAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATG < 1:1640002/150‑1TGTACTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTGTCCAAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATG > 2:181301/1‑150TGTACTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTCTACGAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATG < 1:1869381/150‑1 ACTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTGTCCAAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCC < 1:1210310/150‑1 CTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTGTCCAAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCA > 1:2172257/1‑150 TGGGCTGCGCTCGGGCTTCGTCGCGGGCGCAGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAG > 1:1679387/1‑150 TGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAG > 2:2238355/1‑150 TGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAG > 2:1551805/1‑150 TGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCC < 2:486346/114‑1 TGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCC > 1:486346/1‑114 TGCGCTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGC > 2:1727019/1‑86 TGCGCTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGC < 1:1727019/86‑1 CTCGGGCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAGTACAGCTCG > 2:1844784/1‑150 GCTTCGTCGCGGGCGATGCCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAGTACAGCTCGCTGTA < 1:2238355/150‑1 CCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGAC > 1:458368/1‑85 CCCAGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGAC < 2:458368/85‑1 AGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCTGCGCATGCCGACAGCAGGCCTGGCGGTGGC < 2:1029456/100‑1 AGGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCTGCGCATGCCGACAGCAGGCCTGGCGGTGGC > 1:1029456/1‑100 TGTACTTCGACGAGGATGCGCCACCGCCAGGCCTGCTGTCGGCATGCGCCGAGCTTGGTCGTAGCGATTTTGCGCGCTGCGTGGTGTTCCACAGCCTGTCCAAGCGCTCCAACCTGCCTGGGCTGCGCTCGGGCTTCGTCGCGGGCGATGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1780751‑1780597‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagGCAGGTTGGAGCGCTTGGACAGGCTGTGGAACACCACGCAGCGCGCAAAATCGCTACGACCAAGCTCGGCGCATGCCGACAGCAGGCCTGGCGGTGGCGCATCCTCGTCGAAGTACAGCTCGCTGTA > NC_002947/1780635‑1780761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |