New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1838122	122 (1.380)	7 (0.090)	7/226	NT	5.5%	intergenic (+27/+77)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	= 1838184	129 (1.590)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein

GATCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1837966‑1838122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGT  <  NC_002947/1838184‑1838079                                                                                                                                                                                                                                                                         GATCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTC                                                                                                                   <  2:48345/150‑1        AAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCGGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCA                                                                                                            >  1:173602/1‑150        AAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCA                                                                                                            >  1:249223/1‑150                                                  GCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGC                                                                  >  1:743393/1‑150                                                    GTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGA                                                                >  2:379514/1‑150                                                    GTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGG                                                                                                              <  1:477406/104‑1                                                    GTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGG                                                                                                              >  2:477406/1‑104                                                             GTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGG                                                       <  2:743393/150‑1                                                                 CATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGC                                                   <  1:379514/150‑1                                                                          AGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCC                                          <  1:1031009/150‑1                                                                                                                              ATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGG                                                 <  1:1907254/91‑1                                                                                                                              ATTGAGCCTTGTGTTGCTCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGG                                                 >  2:1907254/1‑91                                                                                                                                                             ACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGT  >  1:1672215/1‑107                                                                                                                                                             ACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGT  <  2:1672215/107‑1                                                                                                                                                             ACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTCGAC       >  1:2376919/1‑102                                                                                                                                                             ACGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTCGAC       <  2:2376919/102‑1                                                                                                                                                                                                                                                                         GATCGACAAGCAGCCAACCAGCCAGCGCGACCTGGCTCTGGTGCAGCAGGCGTTCAACCAGTGGCATGCAGAGAGCGGGCGGCCGCTGTGCCAGTTGTCGGTGATGCTGGCGCACACCGTCAACCATTGAGCCTTGTGTTGCTCCCATTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1837966‑1838122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTACTGCACAGGCCTTAAGTGCGGTGCGATTACTGTGGGAGCGGGCATGCCCGCGAATGGGAGCAACACAAGGCTCAATGGTTGACGGTGT  <  NC_002947/1838184‑1838079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.