| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1896811 | 63 (0.710) | 4 (0.050) | 4/228 | NT | 5.8% | coding (305/318 nt) | sugE | transporter |
| ? | NC_002947 | = 1896838 | 72 (0.880) | coding (278/318 nt) | sugE | transporter | |||||
CCGTGACCCGGCCAAAGGCTTCTTCAAGCGCCTGTGGTCGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1896656‑1896811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctgaTCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCAGCTAACCCCTATCGCAGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCGCCTGCCACGATGGTCACCCGCGACCA < NC_002947/1896838‑1896690 CCGTGACCCGGCCAAAGGCTTCTTCAAGCGCCTGTGGTCGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGG > 1:1814324/1‑150CCGTGACCCGGCCAAAGGCTTCTTCAAGCGCCTGTGGTCGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGG > 1:2121186/1‑150 CGTGACCCGGCCAAAGGCTTCTTCAAGCGCCTGTGGTCGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGC < 1:15171/150‑1 ACCCGGCCAAAGGCTTCTTCAAGCGCCTGTGGTCGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTG > 1:607932/1‑150 CCCGGCCAAATGCTTCTTCACGCGCCTGTGGTGGCGTGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGACCAGGTCAGCCGCCTGCGCGGCCCTCTGCGATTGGGGTTAGCTGGCGCTGc < 2:108160/150‑2 CGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGC < 1:1682965/150‑1 GGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCA < 2:707943/150‑1 CCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCC < 1:1790761/144‑1 CCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCC > 2:1790761/1‑144 GCGCTGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCAGCTAACCCCTATCGCAGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCGCCTGCAACGATGGTCACCCG > 2:1952376/1‑150 acaGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCAGCTAACCCCTATCGCAGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCGCCTGCCACGATGGTCACCCGCG > 2:1241875/4‑150 GCTGATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCAGCTAACCCCTATCGCAGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCGCCTGCCACGATGGTCACCCGCG > 2:493526/1‑150 CTGATCGTCTGCGGCCGTGTCGGCCTGAGAGTCAGCGCCAGCTAACCCCTATCGCGGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCTCCTGCCACGATGGTCACCCGCGA < 2:161413/150‑1 ATCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCAGCTAACCCCTATCGCAGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCGCCTGCCACGATGGTCACCCGCGACCA < 2:1918813/150‑1 CCGTGACCCGGCCAAAGGCTTCTTCAAGCGCCTGTGGTCGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1896656‑1896811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctgaTCGTCTGCGGCCTTGTCGGCCTGAAAGTCAGCGCCAGCTAACCCCTATCGCAGAGGGCCGCGCAGGCGGCTGACCTGTTCGCGCAACACTTCAGGCTGCGCCGCCTCCACCGGGATGGCGGCGCCTGCCACGATGGTCACCCGCGACCA < NC_002947/1896838‑1896690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |