| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1917274 | 81 (0.910) | 8 (0.100) | 7/224 | NT | 9.7% | coding (993/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase |
| ? | NC_002947 | = 1917331 | 75 (0.930) | coding (936/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase | |||||
CGGGTGTTCGAGTACAGCTATCCCGAAACGGCCTGAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1917123‑1917274‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcgcgggtGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCACCTATAA < NC_002947/1917331‑1917184 tgtGTGTTCGAGTACAGCTATCACGAACAAGCATAAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGG < 2:2199436/147‑1CGGGTGTTCGAGTACAGCTATCCCGAAACGGCCTGAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGG < 2:911470/150‑1CGGGTGTTCGAGTACAGCTATCCCGAAACGGCCTGAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGG < 2:79011/150‑1 ACAGCTATCCCGAAACGGCCTGAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGG > 1:1941777/1‑137 ACAGCTATCCCGAAACGGCCTGAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGG < 2:1941777/137‑1 AGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGA < 1:1051994/150‑1 GCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAG > 1:931187/1‑150 ATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTGAACCCGCTCCTACGGGGGCATGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCC < 1:2295319/150‑1 ATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGG > 1:2226822/1‑143 ATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGG < 2:2226822/143‑1 TGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGC < 2:931187/150‑1 GCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCC < 2:375484/120‑1 GCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCC > 1:375484/1‑120 TATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCAC < 1:712495/150‑1 TTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTCTCGCTCAGGGTCACCA < 2:677565/150‑1 TCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATATGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCAC < 1:1431118/150‑1 TCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCAC < 1:958411/150‑1 GCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCACCT > 2:1305342/1‑150 GCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCACCT > 1:1754050/1‑150 GTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCACCTATAA < 2:1840845/150‑1 GTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCC < 1:936685/120‑1 GTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCC > 2:936685/1‑120 CGGGTGTTCGAGTACAGCTATCCCGAAACGGCCTGAAGCGTTGCCCATTCCAGCCTATTCGTTATAGGTGGTGACCCTGAGCGAAAAGGCAGGGCCTGCTGGCCAATTTCCACCCGTCGTTCTCCGTTGCCGCCGCCACCGTATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1917123‑1917274‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcgcgggtGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGGAGAACGACGGGTGGAAATTGGCCAGCAGGCCCTGCCTTTTCGCTCAGGGTCACCACCTATAA < NC_002947/1917331‑1917184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |