| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2071951 = | 81 (0.910) | 10 (0.120) | 9/232 | NT | 12.2% | coding (1500/2133 nt) | PP_1847 | TonB‑dependent ferric siderophore receptor |
| ? | NC_002947 | 2071986 = | 68 (0.810) | coding (1465/2133 nt) | PP_1847 | TonB‑dependent ferric siderophore receptor | |||||
GATGAAAAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2072106‑2071951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttggCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGCA > NC_002947/2071986‑2072132 GATGAAAAGACCTGGGACGAGAACGGCGTAGCCGGGCGGCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCC > 2:1398120/1‑150 GAAAAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCT < 2:430694/150‑1 AAAAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTT < 2:1173476/150‑1 AAAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTG > 1:1475016/1‑150 GCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAGGGGCCGTGCCTCCGGCAGACA‑GG‑CCCTTGGCGTAGCTGGCGTATACCGTG < 1:213146/150‑1 TACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGG > 1:1718470/1‑150 ACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGT > 2:1815184/1‑150 GCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTT < 1:917311/136‑1 GCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTT > 2:917311/1‑136 CCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTT > 1:1733912/1‑150 CCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCG < 1:410094/139‑1 CCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCG > 2:410094/1‑139 GGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCA > 2:991140/1‑150 GGCC‑TGTCTGCCGGAGGCACGG‑CCCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATC > 1:26596/1‑150 CCTTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCA < 1:1104068/150‑1 TTGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGC < 1:1797520/150‑1 TGGCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGCA < 1:991140/150‑1 GATGAAAAGACCTGGGACGAGAACGGCGTAGCCGGGCGCCATACTCGCCAATACGAGCTGCTGCCCAACGCTGCGCTTATCTACAAACCGCAGCCGAACACCACGGTATACGCCAGCTACGCCAAGGGCC‑TGTCTGCCGGAGGCACGGCCCCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2072106‑2071951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccttggCGTAGCTGGCGTATACCGTGGTGTTCGGCTGCGGTTTGTAGATAAGCGCAGCGTTGGGCAGCAGCTCGTATTGGCGAGTATGGCGCCCGGCTACGCCGTTCTCGTCCCAGGTCTTTTCATCCAGGCGCACTTCACGGGCGCCCAGCA > NC_002947/2071986‑2072132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |