New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2301539 = | 51 (0.580) | 6 (0.080) | 5/218 | NT | 10.7% | intergenic (‑140/‑191) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
? | NC_002947 | 2301624 = | 55 (0.700) | intergenic (‑225/‑106) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
TTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2301697‑2301539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaTGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTAC > NC_002947/2301624‑2301768 TTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCC > 2:389411/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCTTTTCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 1:738316/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 2:85619/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 2:1429718/1‑150 TCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCC > 1:473965/1‑150 GAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCA < 1:1005188/150‑1 AACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCAC > 1:2015419/1‑150 ACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACA < 1:1429718/150‑1 AATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGC < 1:1897213/135‑1 AATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGC > 2:1897213/1‑135 GCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTG < 1:951001/136‑1 GCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTG > 2:951001/1‑136 CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTG > 1:1991859/1‑85 CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACATGGACCACGCTTGCCTG < 2:1991859/85‑1 CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACT > 1:154067/1‑150 CACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGC < 2:154067/150‑1 GCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCAT > 1:1043448/1‑150 CCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACT < 1:2105443/94‑1 CCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACT > 2:2105443/1‑94 CCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCT > 2:1483478/1‑127 CCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCT < 1:1483478/127‑1 GCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGG > 2:1969683/1‑150 GCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCAAAACTCTCTGATGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGG < 2:944240/150‑1 CCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTAg > 1:2327224/1‑149 CCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCT > 1:386192/1‑91 CCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCT < 2:386192/91‑1 CATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGG < 1:520944/86‑1 CATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGG > 2:520944/1‑86 TTTGCTCGAACACAATTTTTCCGCCGCAATCAACGGCGAGACAACTGACAAAAATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2301697‑2301539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaTGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTAC > NC_002947/2301624‑2301768 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |