New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2331393	75 (0.850)	4 (0.050)	4/228	NT	5.3%	coding (1703/1776 nt)	PP_2048	acyl‑CoA dehydrogenase
	?	NC_002947	= 2331416	74 (0.900)					coding (1726/1776 nt)	PP_2048	acyl‑CoA dehydrogenase

GCCTACTCGGCCTACGTGCTGTTGGCGGCGATGTGGTTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2331239‑2331393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccacCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCACATC  <  NC_002947/2331416‑2331268                                                                                                                                                                                                                                                                                                                  GCCTACTCGGCCTACGTGCTGTTGGCGGCGATGTGGTTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGC                                                                                                                                                            >  1:2334086/1‑150                                     TTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCG                                                                                                                        >  1:701857/1‑150                                        CAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGG                                                                                                                     <  2:701857/150‑1                                                           AAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGG                                                                                                                      >  1:577669/1‑130                                                           AAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGG                                                                                                                      <  2:577669/130‑1                                                                                                                                                     GCGCCACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAAC        >  2:1624045/1‑150                                                                                                                                                          ACCGAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCACAT   >  2:537959/1‑150                                                                                                                                                          ACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGC                                 <  1:982193/120‑1                                                                                                                                                          ACCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGC                                 >  2:982193/1‑120                                                                                                                                                           CCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCGCATC  <  2:1004565/150‑1                                                                                                                                                                                                                                                                                                                  GCCTACTCGGCCTACGTGCTGTTGGCGGCGATGTGGTTGCAAGCGGCTGTGCGCGCTCAAGCAACACTTGCCACCGGCAGCGCGGAAACAGCCTTCTACAGGGCCAAGCTTGACGCCGCAACGTTCTACTGGCGGCGGATCCTGCCCCGCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2331239‑2331393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccacCCAGCAGGGCCTCGCGGTGAGCAGTGGCGCGGGGCAGGATCCGCCGCCAGTAGAACGTTGCGGCGTCAAGCTTGGCCCTGTAGAAGGCTGTTTCCGCGCTGCCGGTGGCAAGTGTTGCTTGAGCGCGCACAGCCGCTTGCAACCACATC  <  NC_002947/2331416‑2331268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.