New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 234077464 (0.720)9 (0.110) 9/238 NT 11.9% intergenic (+65/‑50) dctA‑II/yraO C4‑dicarboxylate transport protein/transporter YraO
?NC_002947 = 2340789 71 (0.830)intergenic (+80/‑35) dctA‑II/yraO C4‑dicarboxylate transport protein/transporter YraO

CTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2340623‑2340774
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCGCC  <  NC_002947/2340789‑2340641
                                                                                                                                                                                                                                                                                                             
CTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGG                                                                                                                                                         >  2:1324373/1‑150
 TGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGC                                                                                                                                                        >  1:1334440/1‑150
                 CGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGAC                                                                                                                                        <  2:1376705/150‑1
                    CGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTGTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGC                                                                                                                                     <  2:1161436/150‑1
                      gGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCCCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCC                                                                                                                                   <  1:1230270/149‑1
                                                             TCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGG                                                                                                                                      >  2:1787897/1‑108
                                                             TCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGG                                                                                                                                      <  1:1787897/108‑1
                                                                                           CGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCT                                                                                                                                >  2:588894/1‑84
                                                                                           CGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCT                                                                                                                                <  1:588894/84‑1
                                                                                                                     CCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCTGACCC                                                                                                                           >  1:2347607/1‑63
                                                                                                                     CCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCCACCTGCAGCGCAGACGGCCCCCTGACCC                                                                                                                           <  2:2347607/63‑1
                                                                                                                                                    GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTC     <  1:481743/150‑1
                                                                                                                                                    GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTC     <  2:1258155/150‑1
                                                                                                                                                    GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTC     <  1:1880473/150‑1
                                                                                                                                                    GGCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGCGCGAACACCGGCTC     >  2:1978951/1‑150
                                                                                                                                                     GCCACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGGGAGAAAAAAGCTTGAAGGTGTCGTGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCG    >  1:1499297/1‑150
                                                                                                                                                       CACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCGCC  >  1:1219587/1‑150
                                                                                                                                                       CACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTT                                                                                     <  2:948035/67‑1
                                                                                                                                                       CACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTT                                                                                     >  1:948035/1‑67
                                                                                                                                                                                                                                                                                                             
CTGCACAGCCGGCTGAACGGCGAGCCGGTGGTCACCCCCGTCGCTGAAACAGCCGACTGGGTCGCCGAACCACACCGCCACGGCTGAGCCCCGACACCCTCAAGCTTTTTGCAGGCCCCCACCAGGCGTTGCCGGGTGGGGGTCAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2340623‑2340774
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACCTGCAGCGCAGACGGCCCCCTGACCCCCACCCGGCAACGCCTGGTGGGGGCCTGCAAAAAGCTTGAGGGTGTCGGGGCTCAGCCGTGGCGGTGTGGTTCGGCGACCCAGTCGGCTGTTTCAGCGACGGGGGTGACCACCGGCTCGCC  <  NC_002947/2340789‑2340641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.