| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2461453 | 97 (1.100) | 6 (0.070) | 6/238 | NT | 6.1% | coding (409/1251 nt) | lolC | lipoprotein releasing system transmembrane protein LolC |
| ? | NC_002947 | = 2461470 | 92 (1.070) | coding (426/1251 nt) | lolC | lipoprotein releasing system transmembrane protein LolC | |||||
AATCCGCAGGTGGTAGCGGTTGCGCCGTTCACCCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2461303‑2461453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGGCGCCAACTGG‑T‑CCAGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATTGAGCAGCACCTTCTGCACCTTGCCATCATGGGTCAGCAGGCCCTGCATCTGGGTGAACGGCGCAA < NC_002947/2461470‑2461322 AATCCGCAGGTGGTAGCGGTTGCGCCGTTCACCCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGC > 2:2152025/1‑150 ATCCGCAGGTGGTAGCGGTTGCGCCGTTCACCCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCC < 2:2377048/150‑1 ATCCGCAGGTGGTAGCGGTTGCGCCGTTCACCCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCC < 2:2377081/150‑1 CCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCCCGGCGCCAACTGG‑T‑CCAGGCGGCCTTGaa > 1:34513/1‑146 CCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCCCGGCGCCAACTGG‑T‑CCAGGCGGCCTTGCA < 2:34513/148‑1 AATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCCCGGCGCCAACTGG‑T‑CCAGGCGGCCTTG > 1:118852/1‑94 AATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCCCGGCGCCAACTGG‑T‑CCAGGCGGCCTTG < 2:118852/94‑1 ATCGACAACTTCGTCCTGCAAGGCCGCCTGG‑ACCAGTTGGCG‑CCGGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATTGAGCAGCACCTTCTGCACCTTGCCAT < 2:2378416/138‑1 ATCGACAACTTCGTCCTGCAAGGCCGCCTGG‑ACCAGTTGG‑CGCCGGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATTGAGCAGCACCTTCTGCACCTTGCCAT > 1:2378416/1‑138 CCCTGCGCCAACTGG‑T‑CCAGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATT > 2:144403/1‑86 CCGGCGCCAACTGG‑T‑CCAGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATTGAGCAGCACCTTCTGCACCTTGCCATCATGGGTCAGCAGGCCCTGCATCTGGGTGAACGGCGCAA > 2:20218/1‑150 CCGGCGCCAACTGG‑T‑CCAGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATTGAGCAGCACCTTCTGCACCTTGCCATCATGGGTCAGCAGGCCCTGCATCTGGGTGAACGGCGCAA > 2:2206773/1‑150 AATCCGCAGGTGGTAGCGGTTGCGCCGTTCACCCAGATGCAGGGCCTGCTGACCCATGATGGCAAGGTGCAGAAGGTGCTGCTCAATGGCATCGACCCCGCTCGCGAGCGCGAGGTGTCGATCATCGACAACTTCGTCCTGCAAGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2461303‑2461453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGGCGCCAACTGG‑T‑CCAGGCGGCCTTGCAGGACGAAGTTGTCGATGATCGACACCTCGCGCTCGCGAGCGGGGTCGATGCCATTGAGCAGCACCTTCTGCACCTTGCCATCATGGGTCAGCAGGCCCTGCATCTGGGTGAACGGCGCAA < NC_002947/2461470‑2461322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |