| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2628325 | 90 (1.020) | 6 (0.070) | 8/224 | NT | 6.4% | intergenic (+35/‑57) | tig/clpP | trigger factor/ATP‑dependent Clp protease proteolytic subunit |
| ? | NC_002947 | = 2628331 | 93 (1.150) | intergenic (+41/‑51) | tig/clpP | trigger factor/ATP‑dependent Clp protease proteolytic subunit | |||||
TGCGTTCGGTTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2628166‑2628325‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaagccagc‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTGTTCTTC < NC_002947/2628331‑2628183 TGCGTTCGGTTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCC > 1:456996/1‑150 GCGTTCGGTTGTGCTGGAATAACAATTTGTAGATACTGTTCTGCACAAAGCGACTGTGCCCGACAATTCTGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCGGCCGCTCCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCA < 1:1189774/150‑1 TTCGGTTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAA > 2:46736/1‑150 GTTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCA < 1:2326203/150‑1 GTTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCA > 1:2240325/1‑150 GTTGTGCTGGAAGAACAAGTTGTAGATACCGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCA > 2:1092990/1‑150 TTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAG < 2:97168/150‑1 TGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑TCGAA > 2:2289543/1‑150 TGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑TCGAA > 2:1873684/1‑150 AACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑TCGAAGGCTGG < 1:1873684/150‑1 AAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑TCGAAGGCTGGCTT < 1:2289543/150‑1 TACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGC > 1:1786719/1‑79 TACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGC < 2:1786719/79‑1 GAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCA < 1:126700/71‑1 GAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCA > 2:126700/1‑71 CCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑TCGAAGGCTGGCTTGTG > 2:834444/1‑82 CCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑TCGAAGGCTGGCTTGTG < 1:834444/82‑1 TCGTAGGAAACCTCCACAAGCCAGCCTTCGA‑‑GCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTAC > 1:101168/1‑115 TCGTAGGAAACCTCCACAAGCCAGCCTTCGA‑‑GCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTAC < 2:101168/115‑1 TCCACAAGCCAGCCTTCGA‑‑GCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTC < 1:500665/99‑1 TCCACAAGCCAGCCTTCGA‑‑GCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTC > 2:500665/1‑99 gACAGGCCAGC‑‑TGGATGGCTGGCTGGTGGAGGTGTCGTGCGGGAGAAGACCGTTTCTCAGCAGCGGCAGGCGCGTCGGGTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAA < 2:307241/149‑1 GCCAGC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTGT < 1:2359926/150‑1 CAGC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTGTTC < 2:1089059/150‑1 CAGC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGG < 1:1735827/110‑1 CAGC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGG > 2:1735827/1‑110 CAGC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCATTTTTTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTTTTC < 1:442064/150‑1 GC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTGTTCTT > 2:1184192/1‑150 GC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTT < 1:957238/103‑1 GC‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTT > 2:957238/1‑103 C‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTGTTCTTC < 1:236888/150‑1 TGCGTTCGGTTGTGCTGGAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTTAAACCAGCCGAGGCGCCTGCCGCTGCTGAGTAACGGTCTTCTCTCGTAGGAAACCTCCACAAGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2628166‑2628325‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaagccagc‑‑TCGAAGGCTGGCTTGTGGAGGTTTCCTACGAGAGAAGACCGTTACTCAGCAGCGGCAGGCGCCTCGGCTGGTTTAACGGCTTCTTCGTACGAGACCGACTTGTCGGTCACAGTCGCTTTCTGCAGAACAGTATCTACAACTTGTTCTTC < NC_002947/2628331‑2628183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |