| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2664726 | 71 (0.800) | 6 (0.070) | 5/236 | NT | 7.5% | coding (546/2589 nt) | acnA‑II | aconitate hydratase |
| ? | NC_002947 | = 2664743 | 79 (0.930) | coding (563/2589 nt) | acnA‑II | aconitate hydratase | |||||
GCAGGCCTTCGAAAAGAACCGCGCCATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2664573‑2664726‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgCGGTCGCTGTGGACCACCGGTGACATCTTCTCCAGGTTGATCTGGTGCATGATGCCGTTGCCCGGCTGGATCACGTCGACGTTCTTGAACGCCTTCTTGGTCCAGTTGATGAAGTGGAAGCGGTCTTCGTTGCGGCGATCTTCGATGG < NC_002947/2664743‑2664596 GCAGGCCTTCGAAAAGAACCGCGCCATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTC < 2:827014/150‑1 GCCTTCGAAAAGAACCGCGCCATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCG < 1:1087717/150‑1 GCCTTCGAAAAGAACCGCGCCATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCG > 2:2132479/1‑150 ATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCGCGGTCGCTGTGGACCACCGGT < 1:2022877/150‑1 ATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCGCGGTCGCTGTGGACCACCGGT < 1:269786/150‑1 AAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCGCGGTCGCTGTGGACCACCGGTGACATC < 1:471678/96‑1 AAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCGCGGTCGCTGTGGACCACCGGTGACATC > 2:471678/1‑96 GCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCGCGGTCGCTGTGGACCACCGGTGAC < 1:1498044/73‑1 GCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCGCGGTCGCTGTGGACCACCGGTGAC > 2:1498044/1‑73 CACCGCGGTCGCTGCGGCCCAGCAGACACAGCTTCTCCAGGTTGATCTGGTGCATGATGCCGTTGCCCGGCTGGATCACGTCGACGTTCTTGAACGCCTTCTTGGTCCAGTTGATGAAGTGGAAGCGGTCTTCGTTGCGGCGATCTTCGA < 1:1133934/150‑1 ACCGCGGTCGCTGTGGACCACCGGTGACATCTTCTCCAGGTTGATCTGGTGCATGATGCCGTTGCCCGGCTGGATCACGTCGACGTTCTTGAACGCCTTCTTGGTCCAGTTGATGAAGTGGAAGCGGTCTTCGTTGCGGCGATCTTCGAT > 2:217171/1‑150 CGCGGTCGCTGTGGACCACCGGTGACATCTTCTCCAGGTTGATCTGGTGCATGATGCCGTTGCCCGGCTGGATCACGTCGACGTTCTTGAACGCCTTCTTGGTCCAGTTGATGAAGTGGAAGCGGTCTTCGTTGCGGCGATCTTCGATGG > 1:406069/1‑150 GCAGGCCTTCGAAAAGAACCGCGCCATCGAAGATCGCCGCAACGAAGACCGCTTCCACTTCATCAACTGGACCAAGAAGGCGTTCAAGAACGTCGACGTGATCCAGCCGGGCAACGGCATCATGCACCAGATCAACCTGGAGAAGATGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2664573‑2664726‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgCGGTCGCTGTGGACCACCGGTGACATCTTCTCCAGGTTGATCTGGTGCATGATGCCGTTGCCCGGCTGGATCACGTCGACGTTCTTGAACGCCTTCTTGGTCCAGTTGATGAAGTGGAAGCGGTCTTCGTTGCGGCGATCTTCGATGG < NC_002947/2664743‑2664596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |