| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2771815 = | 74 (0.840) | 5 (0.060) | 5/232 | NT | 6.8% | coding (472/546 nt) | PP_2424 | 2'‑5' RNA ligase |
| ? | NC_002947 | 2771845 = | 68 (0.810) | coding (502/546 nt) | PP_2424 | 2'‑5' RNA ligase | |||||
CAAAGCATGCCGGTGTAATCACCCGATCTGAACAGCCCCTGCAGGTACGCATCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTGCGCCAATGGCCAGTAAGCCCCCTTGCGCGACTCGTAAAGCGTGAAGTGTCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2771970‑2771815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgcAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGTCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACACCGGCATGCTTTGGTAAGGCAATTCATCCCCCGG > NC_002947/2771845‑2771991 CAAAGCATGCCGGTGTAATCACCCGATCTGAACAGCCCCTGCAGGTACGCATCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTGCGCCAATGGCCAGTAAGCCCCCTTGCGCGACTCGTAAAGCGTGAAGTG > 2:99195/1‑150CAAAGCATGCCGGTGTAATCACCCGATCTGAACAGCCCCTGCAGGTACGCATCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTCGGCCAATGGCCAGTAAGCCCCCTTGCGCGACTCGTAAAGCGTGAGGTG > 1:149354/1‑150 AAAGCATGCCGGTGTAATCACCCGATCTGAACAGCCCCTGCAGGTACGCATCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTGCGCCAATGGCCAGTAAGCCCCCTTGCGCGACTCGTAAAGCGTGAAGTGT > 2:1290260/1‑150 TCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTGCGCCAATGGCCAGTAAGCCCCCTTGCGCGACACTTCACGCTTTACGAGTCGCGCAAGGGGGCTTACTGGCCA < 1:1982110/123‑1 TCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTGCGCCAATGGCCAGTAAGCCCCCTTGCGCGACACTTCACGCTTTACGAGTCGCGCAAGGGGGCTTACTGGCCA > 2:1982110/1‑123 CCCCCTTGCGCGACTCGTAAAGCGTGAAGTGTCGCGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCC < 1:1399487/88‑1 CCCCCTTGCGCGACTCGTAAAGCGTGAAGTGTCGCGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCC > 2:1399487/1‑88 GCGACTCGTAAAGCGTGAAGTGTCGCGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGTCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACACCGGCATGC > 1:477295/1‑150 GTCGCGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGTCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACAC < 1:1843274/121‑1 GTCGCGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGTCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACAC > 2:1843274/1‑121 TCGCGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGTCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACACCGGCATGCTTTGGTCAGGCACTTCATCCCC > 2:614177/1‑150 CGCAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGGCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACACCGGCATGCTTTGGTAAGGCAATTCATCCCCCGG < 2:745722/150‑1 CAAAGCATGCCGGTGTAATCACCCGATCTGAACAGCCCCTGCAGGTACGCATCCGGGACAAGGCGTTTTTCGCCCGGCGAGTCAGTCCGCCAGCGGCCACTGCGCCAATGGCCAGTAAGCCCCCTTGCGCGACTCGTAAAGCGTGAAGTGTCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2771970‑2771815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgcAAGGGGGCTTACTGGCCATTGGCGCAGTGGCCGCTGGCGGACTGACTCGCCGGGCGAAAAACGCCTTGTCCCGGATGCGTACCTGCAGGGGCTGTTCAGATCGGGTGATTACACCGGCATGCTTTGGTAAGGCAATTCATCCCCCGG > NC_002947/2771845‑2771991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |