| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2844402 = | 80 (0.900) | 4 (0.050) | 4/238 | NT | 5.2% | coding (282/1005 nt) | PP_2495 | hypothetical protein |
| ? | NC_002947 | 2844429 = | 68 (0.790) | coding (255/1005 nt) | PP_2495 | hypothetical protein | |||||
GTCGGTCTGAACCCCTATAAGTCGCAGCTGGAGCTGTGGCTGGAAAAGACCAGTCGTGATGCTGGCATGCCCAAGGCCGATCCTCAGGATGAGGAAAGCCCTATGTACTGGGGCAACGTGCTGGAGCCCATCGTGGCCTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2844545‑2844402‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGACTTATAGGGGTTCAGACCGACCGCCGCCGCAGCGTCCGAACTGCCGATGC > NC_002947/2844429‑2844574 GTCGGTCTGAACCCCTATAAGTCGCAGCTGGAGCTGTGGCTGGAAAAGACCAGTCGTGATGCTGGCATGCCCAAGGCCGATCCTCAGGATGAGGAAAGCCCTATGTACTGGGGCAACGTGCTGGAGCCCATCGTGGCCTGG > 1:1190623/1‑141GTCGGTCTGAACCCCTATAAGTCGCAGCTGGAGCTGTGGCTGGAAAAGACCAGTCGTGATGCTGGCATGCCCAAGGCCGATCCTCAGGATGAGGAAAGCCCTATGTACTGGGGCAACGTGCTGGAGCCCATCGTGGCCTGG < 2:1190623/141‑1 ACGTGCTGGAGCCCATCGTGGCCTGGCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCA < 1:235058/106‑1 ACGTGCTGGAGCCCATCGTGGCCTGGCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCA > 2:235058/1‑106 TGCTGGAGCCCATCGTGGCCTGGCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCA > 1:2266503/1‑87 TGCTGGAGCCCATCGTGGCCTGGCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCA < 2:2266503/87‑1 gtACGTTGCCCTAGTACATAGTGCTTTCCTCATCCTTAGGATCGGCCGTGGGCATGCCAGCATCATGACTGTTCTTTTCCAGCCACAGCTCCAGCTGCGACTTATAGGGGTTCAGACCGACCGCCGCCGCAGCGTCCGAACTGCCGATGC < 2:788804/148‑1 GCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGACTTATAGGGGTTCAGACCGACCGCCGCCGCAGCGTCCGAACTGCCGATGC < 2:305997/150‑1 GCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGACTTATAGGGGTTCAGA > 1:1153268/1‑116 GCACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGACTTATAGGGGTTCAGA < 2:1153268/116‑1 GCACGTTGCCCCAGTACATAAGGATTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGGGTTTTCAAGCCAAAGCTCCAGCTGCGACTTATAGGGGTTCAGACCGACCGCCACCGCAGCGTCCGAACTGCCGATGC > 1:1489403/1‑150 CACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGAC < 1:786275/100‑1 CACGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGAC > 2:786275/1‑100 GTCGGTCTGAACCCCTATAAGTCGCAGCTGGAGCTGTGGCTGGAAAAGACCAGTCGTGATGCTGGCATGCCCAAGGCCGATCCTCAGGATGAGGAAAGCCCTATGTACTGGGGCAACGTGCTGGAGCCCATCGTGGCCTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2844545‑2844402‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacGTTGCCCCAGTACATAGGGCTTTCCTCATCCTGAGGATCGGCCTTGGGCATGCCAGCATCACGACTGGTCTTTTCCAGCCACAGCTCCAGCTGCGACTTATAGGGGTTCAGACCGACCGCCGCCGCAGCGTCCGAACTGCCGATGC > NC_002947/2844429‑2844574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |