| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2933558 = | 91 (1.030) | 6 (0.070) | 4/240 | NT | 5.8% | coding (587/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | 2933595 = | 105 (1.220) | coding (550/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein | |||||
CAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2933709‑2933558‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCAGCACATCCGCTT > NC_002947/2933595‑2933741 CAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGG > 1:792328/1‑150 AGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGG < 1:1998841/150‑1 AGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCCGACAATGCCTGACGAAGTCCGCCATCGTCAGGCCTGCCAGGGGCGT < 2:1410906/150‑1 GGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCCGACAATGCCTGACGAAGTCCGCCATCGTCAGGCCTGCCAGGGGCGTGTCGCTGC < 2:952623/150‑1 GGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCCGACAATGCCTGACGAAGTCCGCCATCGTCAGGCCTGCCAGGGGCGTGTCGCTGC < 2:952646/150‑1 GGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGC > 1:920848/1‑104 GGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGC < 2:920848/104‑1 GGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTT < 1:1410906/150‑1 GCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTG < 1:952623/150‑1 GCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTG < 1:952646/150‑1 GGCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCAGCACATCCGCTT < 1:925588/150‑1 CAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGCATTGTCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2933709‑2933558‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCAGCACATCCGCTT > NC_002947/2933595‑2933741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |