| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2947591 | 97 (1.100) | 7 (0.080) | 6/234 | NT | 6.8% | intergenic (‑27/‑185) | yijP/PP_2580 | phosphoethanolamine transferase CptA/hypothetical protein |
| ? | NC_002947 | = 2947604 | 101 (1.200) | intergenic (‑40/‑172) | yijP/PP_2580 | phosphoethanolamine transferase CptA/hypothetical protein | |||||
CCGGTCGTCCCGCTGAACAGCAGCAGCGCCTGGGTTACACCGGAGAAATACCAGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2947437‑2947591‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccaCGCGCACAACCGCTGGCCGCCAAGGTACGACGAGGCATACGTGTCACACACTACATCCCCCGCCGCGCACAAGCGCGTGGACTGGGCCGGCCTCGGCTGGCTCTTGCTGTTCTTCTGGTATTTCTCCGGTGTAACCCAGGCGCTG < NC_002947/2947604‑2947460 CCGGTCGTCCCGCTGAACAGCAGCAGCGCCTGGGTTACACCGGAGAAATACCAGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGC < 2:1885935/150‑1 GGTCGTCCCGCTGAACAGCAGCAGCGCCTGGGTTACACCGGAGAAATACCAGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGG > 2:1583680/1‑150 ATACCAGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTCACGCCCTTTCCGGCCACGCGCACAACCGCTGGCCGCCAAGGTACGACGAGGCATACG < 2:2286933/150‑1 AGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTTCCGGCCACGCGCACAACCGCTGGCCGCCAA > 1:2225776/1‑126 AGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTTCCGGCCACGCGCACAACCGCTGGCCGCCAA < 2:2225776/126‑1 AGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGTGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGGCCACGCGCACAACCGCTGGCCGCCAA > 1:1744070/1‑114 AGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGTGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGGCCACGCGCACAACCGCTGGCCGCCAA < 2:1744070/114‑1 GCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGGCCACGCGCACAACCGCTGGCCGCCAAGGTAC > 1:4337/1‑91 GCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGGCCACGCGCACAACCGCTGGCCGCCAAGGTAC < 2:4337/91‑1 GGCCACGCGCACAACCGCTGGCCGCCAAGGTACGACGAGGCATACGTGTCACACACTACATCCCCCGCCGCGCACAAGCGCGTGGACTGGGCCGGCCTCGGCTGGCTCTTGCTGTTCTTCTGGTATTTCTCCGGTGTAACCCAGGCGCTG > 2:1194185/1‑150 GGCCACGCGCACAACCGCTGGCCGCCAAGGTACGACGAGGCATACGTGTCACACACTACATCCCCCGCCGCGCACAAGCGCGTGGACTGGGCCGGCCTCGGCTGGCTCTTACTGTTCTTCTGGTATTTCTACGGTGTAACCCAGGCGCTG > 2:790651/1‑150 CACGCGCCCAACCGCTGGCCGCCAAGGTACGACGAGGCATACGTGTCACACACTACATCCCCCGCCGCGCACAAGCGCGTGGACTGGGCCGGCCTCGGCTGGCTCTTGCTGTTCTTCTGGT > 2:1200345/1‑121 CACGCGCACAACCGCTGGCCGCCAAGGTACGACGAGGCATACGTGTCACACACTACATCCCCCGCCGCGCACAAGCGCGTGGACTGGGCCGGCCTCGGCTGGCTCTTGCTGTTCTTCTGGT < 1:1200345/121‑1 CCGGTCGTCCCGCTGAACAGCAGCAGCGCCTGGGTTACACCGGAGAAATACCAGAAGAACAGCAAGAGCCAGCCGAGGCCGGCCCAGTCCACGCGCTTGTGCGCGGCGGGGGATGTAGTGTGTGACACGTATGCCTCGTC‑GTACCTTGGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2947437‑2947591‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccaCGCGCACAACCGCTGGCCGCCAAGGTACGACGAGGCATACGTGTCACACACTACATCCCCCGCCGCGCACAAGCGCGTGGACTGGGCCGGCCTCGGCTGGCTCTTGCTGTTCTTCTGGTATTTCTCCGGTGTAACCCAGGCGCTG < NC_002947/2947604‑2947460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |