| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2987469 = | NA (NA) | 8 (0.100) | 8/234 | NT | NA | coding (973/2991 nt) | PP_2612 | membrane protein |
| ? | NC_002947 | 2987491 = | NA (NA) | coding (951/2991 nt) | PP_2612 | membrane protein | |||||
CAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2987622‑2987469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCT > NC_002947/2987491‑2987639 CAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGAAAAGCCTGTACCCGGCGGATGCCCCTTCG > 2:2396473/1‑150 AACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGC > 2:186427/1‑150 CTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGG < 1:1907755/150‑1 CGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCA < 2:781856/150‑1 CCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTT < 1:1195000/115‑1 CCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTT > 2:1195000/1‑115 TTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGAAGGGGCATCCGCCGGGTACAGGC > 1:837946/1‑87 TTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGAAGGGGCATCCGCCGGGTACAGGC < 2:837946/87‑1 CACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCG > 2:2233232/1‑75 CACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGATGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCG < 1:2233232/75‑1 CCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGC < 2:2383220/62‑1 CCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGC > 1:2383220/1‑62 CTGTACCCGGCGGATGCCCCTTCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCT > 1:838732/1‑150 CCGGCGGATGCCCCTTCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCT > 2:399035/1‑141 CCGGCGGATGCCCCTTCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCT < 1:399035/141‑1 CGCCGTGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATACAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGT < 1:156913/150‑1 CGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGT < 1:590841/150‑1 CGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGT < 1:2337467/150‑1 GCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGNTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGATTTGTG > 1:858145/1‑150 CGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTG < 2:11231/150‑1 GGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGC > 2:902535/1‑150 GGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGC > 1:1631703/1‑150 GGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCT > 2:1202616/1‑150 GGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCAGGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCT > 2:1109055/1‑150 CAACCTCCCGAGCAGGAGCGCGTGCCGGCATGCTACCGGCTGGATGCCGAACAGCTCAGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2987622‑2987469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCT > NC_002947/2987491‑2987639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |