| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3464323 | 97 (1.100) | 7 (0.100) | 7/198 | NT | 7.5% | coding (78/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 3464362 | 94 (1.320) | coding (39/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein | |||||
TGCCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3464151‑3464323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggtttacccgcgaaGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTGAA < NC_002947/3464362‑3464218 TGCCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTT < 2:414098/150‑1TGCCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTT > 2:2064475/1‑150 CGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG > 2:2121149/1‑150 CGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTG > 2:1212682/1‑150 GCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGG > 1:1817819/1‑150 GGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGG < 1:2310434/150‑1 GGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAACTACAAGCCCCCACAATACTTGTGGGAGCGGG < 2:1482412/150‑1 GGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGT < 1:1784073/150‑1 GTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGA > 2:164732/1‑150 gGTCGAAATGCCGGAAGCTGGCGGCGTGGCGGGGGGGTTCACCGTAGCCCGTGATGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCA < 1:760198/149‑1 TGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT < 1:1357076/104‑1 TGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT > 2:1357076/1‑104 GCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAATGCGTCAGACCAGACAACCTCGTTGCC < 1:2121149/150‑1 CACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGG < 2:100500/150‑1 TAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT < 1:1313908/78‑1 TAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGT > 2:1313908/1‑78 GTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCC > 2:830640/1‑123 GTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCC < 1:830640/123‑1 TGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGC < 2:1305852/109‑1 TGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGC > 1:1305852/1‑109 GTGGGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCAGACGCCTTCGGGGGTATATCTGCCCCCACAATTATTGTGTGGTCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCC < 2:2079542/150‑1 GGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAG < 1:610475/129‑1 GGAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAG > 2:610475/1‑129 GAGCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTA < 1:1756313/150‑1 gctGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACG < 1:199960/147‑1 GCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAAC > 2:921236/1‑69 GCGGGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAAC < 1:921236/69‑1 GGTTTACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTC < 2:1063033/150‑1 TACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACG > 2:2100234/1‑150 TACCCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACG > 1:528970/1‑150 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCG > 1:888264/1‑95 CCGCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCG < 2:888264/95‑1 GCGAAGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTGAA < 1:510846/150‑1 TGCCGCCCTTGGGGGCGGAGGGGTTTACATAGTCGAAATGCCGGAAGCTGGCGGCGTAGCGGGGGGCTTCACCGTAGACCGTAAGGGCGTGGGTGGGAGCGGCCTGGACCGTAAAGCCTATGCACGAAAATACAAGCCCCCACAATACTTGTGGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3464151‑3464323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggtttacccgcgaaGAGGCCAGACCAGACAACCTCGTTGCCTGCTCCGACGCATTCGCGGGTAAACCCGCTCCCACAAGTATTGTGGGGGCTTGTATTTTCGTGCATAGGCTTTACGGTCCAGGCCGCTCCCACCCACGCCCTTACGGTCTACGGTGAA < NC_002947/3464362‑3464218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |