| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3617810 | 74 (0.840) | 6 (0.070) | 6/242 | NT | 7.5% | coding (792/1170 nt) | PP_3188 | hypothetical protein |
| ? | NC_002947 | = 3617848 | 75 (0.860) | coding (830/1170 nt) | PP_3188 | hypothetical protein | |||||
GCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3617718‑3617810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCTGGCGTGCCTCGTTGAGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACA < NC_002947/3617848‑3617701 GCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCTGGCGTGCC < 1:808193/141‑1GCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCTGGCGTGCC > 2:808193/1‑141 CTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCT < 1:2302465/112‑1 CTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAGGCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCT > 2:2302465/1‑112 TATCGCCAGGCCCTCAACGAGGCACGCCAGCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCC < 1:2290006/69‑1 TATCGCCAGGCCCTCAACGAGGCACGCCAGCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCC > 2:2290006/1‑69 AGCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCTGGCGTGCCTCGTTGAGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACA > 2:1310842/1‑150 GCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGTCGAGCCTCGCTGACGATTGCGCGCACTATCGCCAGGCCCTCAACGAGGCACGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3617718‑3617810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agCCGTTGGCCGGGCGCAGATGCTGCGCCACATCCAGCGCCTGGCGTGCCTCGTTGAGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACA < NC_002947/3617848‑3617701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |