New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3619873 = | 97 (1.100) | 6 (0.070) | 4/232 | NT | 6.3% | coding (523/948 nt) | PP_3190 | ornithine cyclodeaminase/mu‑crystallin family protein |
? | NC_002947 | 3619907 = | 87 (1.040) | coding (489/948 nt) | PP_3190 | ornithine cyclodeaminase/mu‑crystallin family protein |
CGCCATCCCAGGTCAAGGCCATTGGCATCCTCGGCACCGGCATGCAGGCGCAGATGCAGCTTGAGCAGCTTCGCGCGGTGACCGATTGTCGCCAGGTGATTGTCTGGGGCCGGCATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3620025‑3619873 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTTGACCTGGGATGGCGCCAGCAGCCGGGCGGCGATACGCCC > NC_002947/3619907‑3620050 CGCCATCCCAGGTCAAGGCCATTGGCATCCTCGGCACCGGCATGCAGGCGCAGATGCAGCTTGAGCAGCTTCGCGCGGTGACCGATTGTCGCCAGGTGATTGTCTGGGGCCGGCATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCC < 2:1178138/150‑1 GCCATCCCAGGTCAAGGCCATTGGCATCCTCGGCACCGGCATGCAGGCGCAGATGCAGCTTGAGCAGCTTCGCGCGGTGACCGATTGTCGCCAGGTGATTGTCTGGGGCCGGCATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCCG > 1:1580280/1‑150 GCCATCCCAGGTCAAGGCCATTGGCATCCTCGGCACCGGCATGCAGGCGCAGATGCAGCTTGAGCAGCTTCGCGCGGTGACCGATTGTCGCCAGGTGATTGTCTGGGGCCGGCATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCCG > 2:977648/1‑150 CCATCCCAGGTCAAGGCCATTGGCATCCTCGGCACCGGCATGCAGGCGCAGATGCAGCTTGAGCAGCTTCGCGCGGTGACCGATTGTCGCCAGGTGATTGTCTGGGGCCGGCATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCCGC < 1:977648/150‑1 ATGAACGCGGGCTTGCGGGATCTCCCGAATTTGACAGCGTTCATGCCGGCCCCATACAAGCACCTGGCGACAATCGGGCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTTGACCTG > 2:25039/1‑150 ATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTTGACCTG > 1:415317/1‑150 ACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTT > 1:2110951/1‑140 ACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTT < 2:2110951/140‑1 ACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCC > 1:2211589/1‑138 ACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCC < 2:2211589/138‑1 CCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTTGACCTGGGATGGCGCCAGCAGCCGGGCGGCGATACGCCC > 2:2149618/1‑150 CCCGCGTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGATCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTTGACCTGGGATGGCGCCAGCAGCCGGGCGGCGATACGCCC > 2:1751411/1‑150 CGCCATCCCAGGTCAAGGCCATTGGCATCCTCGGCACCGGCATGCAGGCGCAGATGCAGCTTGAGCAGCTTCGCGCGGTGACCGATTGTCGCCAGGTGATTGTCTGGGGCCGGCATGAACGCGGGCTTGCGGCCTATACCGCATTTGCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3620025‑3619873 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgTTCATGCCGGCCCCAGACAATCACCTGGCGACAATCGGTCACCGCGCGAAGCTGCTCAAGCTGCATCTGCGCCTGCATGCCGGTGCCGAGGATGCCAATGGCCTTGACCTGGGATGGCGCCAGCAGCCGGGCGGCGATACGCCC > NC_002947/3619907‑3620050 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |