| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3685701 | 63 (0.710) | 6 (0.070) | 5/230 | NT | 8.7% | coding (66/1332 nt) | PP_3251 | hypothetical protein |
| ? | NC_002947 | = 3685720 | 67 (0.810) | coding (85/1332 nt) | PP_3251 | hypothetical protein | |||||
CCTGATGCCAAGCCTGCACCGCAGCCTGCGCCCGACCCCGAGCCGATGCCGGGGCAGAAGCCGAGCCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3685546‑3685701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcgaGCAGCGCTTGGTAGCGTTGTCGCAGGCTGGTCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATCACCGTCATACCGTGCTCCTTGTCTTCTTACTGGCTCGGCTTCTGCCCCGGCATCGGCTCGGGGTCGGGCGC < NC_002947/3685720‑3685573 CCTGATGCCAAGCCTGCACCGCAGCCTGCGCCCGACCCCGAGCCGATGCCGGGGCAGAAGCCGAGCCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGC > 2:1783397/1‑150CCTGATGCCAAGCCTGCACCGCAGCCTGCGCCCGACCCCGAGCCGATGCCGGGGCAGAAGCCGAGCCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGC < 2:1071835/150‑1 GATGCCAAGCCTGCACCGCAGCCTGCGCCCGACCCCGAGCCGATGCCGGGGCAGAAGCCGAGCCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTG > 1:844052/1‑150 GCCAAGCCTGCACCGCAGCCTGCGCCCGACCCCGAGCCGATGCCGGGGCAGAAGCCGAGCCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGA > 2:1586119/1‑150 CCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGAGCAGCGCTTGGTAGCGTTGTt < 1:1290332/112‑2 CCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGAGCAGCGCTTGGTAGCGTTGTC > 2:1290332/1‑112 GTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGAGCAGCGCTTGGTAGCGTTGTCGCA > 2:732669/1‑112 GTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGAGCAGCGCTTGGTAGCGTTGTCGCA < 1:732669/112‑1 GTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTG < 2:1768666/85‑1 GTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTG > 1:1768666/1‑85 CAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGAGCAGCGCTTGGTAGCGTTGTC > 1:1872379/1‑62 CAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGAGCAGCGCTTGGTAGCGTTGTC < 2:1872379/62‑1 GCCTGCGAGCAGCGCTTGGTAGCGTTGTCGCAGGCTGGTCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATCACCGTCATACCGTGCTCCTTGTCTTCTTACTGGCTCGGCTTCTGCCCCGGCATCGGCTCGGGGTC > 2:121368/1‑150 CTGCGAGCAACGCTTGGTAGCGTTGTCGCAGGCAGGGCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATAACCGTCATACCGGGCTCCTTGTCTTCTTACTGGCTCGGCTTCTGCCACGGCATCGGCTCGGGcatgg > 2:372172/1‑145 TGCGAGCAGCGCTTGGTAGCGTTGTCGCAGGCTGGTCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATCACCGTCATACCGTGCTCCTTGTCTTCTTACTGtc > 1:1332284/1‑114 TGCGAGCAGCGCTTGGTAGCGTTGTCGCAGGCTGGTCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATCACCGTCATACCGTGCTCCTTGTCTTCTTACTGGC < 2:1332284/116‑1 GAGCAGCGCTTGGTAGCGTTGTCGCAGGCTGGTCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATCACCGTCATACCGTGCTCCTTGTCTTCTTACTGGCTCGGCTTCTGCCCCGGCATCGGCTCGGGGTCGGGCGC > 2:1631441/1‑150 CCTGATGCCAAGCCTGCACCGCAGCCTGCGCCCGACCCCGAGCCGATGCCGGGGCAGAAGCCGAGCCAGTAAGAAGACAAGGAGCACGGTATGACGGTGATGAACCGCAATACTGCAAGCGCTGCGCAAGTGGTCACCGAATCGACCAGCCTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3685546‑3685701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcgaGCAGCGCTTGGTAGCGTTGTCGCAGGCTGGTCGATTCGGTGACCACTTGCGCAGCGCTTGCAGTATTGCGGTTCATCACCGTCATACCGTGCTCCTTGTCTTCTTACTGGCTCGGCTTCTGCCCCGGCATCGGCTCGGGGTCGGGCGC < NC_002947/3685720‑3685573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |