| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3743810 | 75 (0.850) | 6 (0.070) | 5/234 | NT | 7.6% | coding (51/1002 nt) | paoB | aromatic aldehyde dehydrogenase FAD‑binding subunit |
| ? | NC_002947 | = 3743823 | 74 (0.880) | coding (64/1002 nt) | paoB | aromatic aldehyde dehydrogenase FAD‑binding subunit | |||||
GCATATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3743677‑3743810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgag‑cTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC < NC_002947/3743823‑3743675 GCATATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAGCCTGGC‑GTCA‑GCCAGGC < 1:751303/150‑1 TATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑CTGGC‑GTCA‑GCCAGGCTCAC < 1:2066748/150‑1 CACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑CTGGC‑GTCA‑GCCAGGCTCAC > 1:1783521/1‑52 CACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑CTGGC‑GTCA‑GCCAGGCTCAC < 2:1783521/52‑1 CAGCGAAGCCGTGAGCCTGGCTGAC‑‑GCCA‑GCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTC < 1:807160/133‑1 CAGCGAAGCCGTGAGCCTGGC‑‑TGACGCCA‑GCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTC > 2:807160/1‑133 TGAG‑CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATAT < 1:1202298/150‑1 TGAG‑CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATAT > 1:1692758/1‑150 CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCTTGGATTCGGCCCTCGTTGTGGCGGTGCCATGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC < 1:431581/150‑1 CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC < 1:1061809/150‑1 CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC < 1:1473889/150‑1 CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC < 1:214916/150‑1 CTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC > 1:552287/1‑150 GCATATAGCAACATCGTCGCTGCGGTGGAAGAAGCCCTACCGTTGATGACGGACCTGGCCCCGCCACAACGAGGGCCGAATCCATGACGCCTTTCAGCTACCACAAGCCCGCATCAATCAGCGAAGCCGTGAG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3743677‑3743810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgag‑cTGGC‑GTCA‑GCCAGGCTCACGGCTTCGCTGATTGATGCGGGCTTGTGGTAGCTGAAAGGCGTCATGGATTCGGCCCTCGTTGTGGCGGGGCCAGGTCCGTCATCAACGGTAGGGCTTCTTCCACCGCAGCGACGATGTTGCTATATGCAC < NC_002947/3743823‑3743675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |