| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3795962 = | 83 (0.940) | 8 (0.090) | 5/240 | NT | 8.6% | coding (535/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
| ? | NC_002947 | 3795995 = | 90 (1.040) | coding (502/1884 nt) | fcs | feruloyl‑CoA‑synthetase | |||||
CGGTATTGCCTATTGCCCGGTGTCGCCGGCCTACGCGCTGTTGTCGCAAGACTTCGCCAAGTTGCGCCATGTCTGCGAGGTGCTCACCCCCGGAGTGGTCTTCGTCAGCGACAGCCAGCCGTTCCAGCGCGCCTTCGAGGCGGTGCTGG‑ACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3796113‑3795962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGACAACAGCGCGTAGGCCGGCGACACCGGGCAATAGGCAATAC > NC_002947/3795995‑3796111 CGGTATTGCCTATTACCCGGTGTCTCCGCCCTACGCGCTGTTGTCGCAAGACTTCGCCAAGTTGCGCCATGTCTGCGAGGTGCTCACCCCCGGAGTGGTCTTCGTCAGCGACAGCCAGCCGTTCCAGCGCGCCTTCGAGGCGGTGCTGG‑A < 2:462596/150‑1 GGTATTGCCTATTGCCCGGTGTCGCCGGCCTACGCGCTGTTGTCGCAAGACTTCGCCAAGTTGCGCCATGTCTGCGAGGTGCTCACCCCCGGAGTGGTCTTCGTCAGCGACAGCCAGCCGTTCCAGCGCGCCTTCGAGGCGGTGCTGG‑AC > 1:1258044/1‑150 AGCCGTTCCAGCGCACCTTCGAGGCGGTGCTGG‑ACGGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGAC > 1:1100700/1‑113 AGCCGTTCCAGCGCACCTTCGAGGCGGTGCTGG‑ACGGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGAC < 2:1100700/113‑1 GTTCCAGCGCGCCTTCGAGGCGGTGCTGGAACGGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCTACAACAGCGCGGAGGCCGGCGACACCGGGCAATCGGCAATAC > 2:1100644/1‑150 GTTCCAGCGCGCCTTCGAGGCGGTGCTGGAACGGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGACAACAGCGCGTAGGCCGGCGACACCGGGCAATAGGCAATAC > 1:1203836/1‑150 GTTCCAGCGCGCCTTCGAGGCGGTGCTGGAACGGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGACAACAGCGCGTAGGCCGGCGACACCGGGCAATAGGCAATAC > 1:276056/1‑150 GTTCCAGCGCGCCTTCGAGGCGGTGCTGGAACGGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGACAACAGCGCGTAGGCCGGCGACACCGGGCAATAGGCAATAC > 2:556465/1‑150 AGCGCGCCTTCGAGGCGGTGCTGG‑ACGGCTGGCTGTCGCTGACGAAGACCACTCCGG < 1:887753/57‑1 AGCGCGCCTTCGAGGCGGTGCTGG‑ACGGCTGGCTGTCGCTGACGAAGACCACTCCGG > 2:887753/1‑57 CGGTATTGCCTATTGCCCGGTGTCGCCGGCCTACGCGCTGTTGTCGCAAGACTTCGCCAAGTTGCGCCATGTCTGCGAGGTGCTCACCCCCGGAGTGGTCTTCGTCAGCGACAGCCAGCCGTTCCAGCGCGCCTTCGAGGCGGTGCTGG‑ACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3796113‑3795962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgGCTGGCTGTCGCTGACGAAGACCACTCCGGGGGTGAGCACCTCGCAGACATGGCGCAACTTGGCGAAGTCTTGCGACAACAGCGCGTAGGCCGGCGACACCGGGCAATAGGCAATAC > NC_002947/3795995‑3796111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |