New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3917025	77 (0.870)	7 (0.080)	6/230	NT	8.4%	coding (763/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	= 3917056	80 (0.970)					coding (794/3129 nt)	mexB	multidrug resistance protein MexB

AGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3916874‑3917025 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccggGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGAT  <  NC_002947/3917056‑3916914                                                                                                                                                                                                                                                                                                         AGCCATCGCCGCGCAGCACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCC                                                                                                                                                   <  1:124041/150‑1                             GCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGA                                                                                                                       >  1:1043950/1‑150                                     CAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCG                                                                                                               <  2:1304523/150‑1                                     CAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCG                                                                                                               <  2:1043950/150‑1                                         ATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTT                                                                                                           <  1:57710/150‑1                                                   TGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG                                                                                                          <  1:1408286/141‑1                                                   TGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG                                                                                                          >  2:1408286/1‑141                                                         GCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATG                                                                                           <  2:568657/150‑1                                                                                                                                                 CAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGA   <  2:689405/150‑1                                                                                                                                                  AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGAT  >  1:243338/1‑150                                                                                                                                                  AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGAT  >  2:2374744/1‑150                                                                                                                                                  AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGA   <  1:1941262/149‑1                                                                                                                                                  AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGA   >  2:1941262/1‑149                                                                                                                                                   ACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGC                                                                                                    <  2:1517551/51‑1                                                                                                                                                   ACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGC                                                                                                    >  1:1517551/1‑51                                                                                                                                                    CCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTG                                                                      <  2:1039276/80‑1                                                                                                                                                    CCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTG                                                                      >  1:1039276/1‑80                                                                                                                                                                                                                                                                                                         AGCCATCGCCGCGCAGAACGCCCAGGTCGCCCCTGGCAGCATCGGCGATCTGCCCAGCCGCAGCACCCAGGAAATCACCGCCAACGTGGTGGTCAAAGGCCAGTTGAGCAGCCCCGACGAGTTTGCTGCCATTGTCCTGCGTGCCAACCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3916874‑3917025 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacccggGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGGCACGCAGGACAATGGCAGCAAACTCGTCGGGGCTGCTCAACTGGCCTTTGACCACCACGTTGGCGGTGATTTCCTGGGTGCTGCGGCTGGGCAGATCGCCGAT  <  NC_002947/3917056‑3916914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.