| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4131170 | 111 (1.250) | 15 (0.180) | 14/230 | NT | 12.5% | intergenic (+38/+74) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease |
| ? | NC_002947 | = 4131200 | 106 (1.280) | intergenic (+68/+44) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease | |||||
TGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4131014‑4131170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccacaggTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCATCTGCTC < NC_002947/4131200‑4131052 TGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGC > 2:203579/1‑150 gcaTAACCAGCAGGGCGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACGGCTCAAGCCCAGGAATGTGTGCGCCAACCCAAGAACGTGCATTGATCCGAAGGCCTGTTCTCGAGCTTGCCCGCGCC > 2:1739081/4‑150 CTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCC > 2:1792635/1‑150 AACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACA < 1:2346876/150‑1 ACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAG < 2:243927/150‑1 CCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGG > 2:1882425/1‑150 CCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGG > 2:1415451/1‑150 CAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGT > 1:1647288/1‑150 TGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACC > 1:2391201/1‑150 GCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTG < 2:2391201/150‑1 CAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGTACATCACCGGCCTTGG < 2:1647288/150‑1 AGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGT < 2:1970067/150‑1 GATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTG < 2:1917358/150‑1 GATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCCCAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTG < 2:2271148/150‑1 GATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG < 1:2167945/150‑1 GCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAG < 1:704180/150‑1 GAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACA < 2:1100783/150‑1 CCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCTTCTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGC > 2:661482/1‑117 CCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCTTCTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGC < 1:661482/117‑1 CAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCTTCTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTGGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCA < 1:1519054/150‑1 AGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCTTCTCCGGGTGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCAC < 1:760055/150‑1 CCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTAT > 1:705238/1‑89 CCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTAT < 2:705238/89‑1 CCNCAGGTACATCACCGGCCTTGGGCCNTACGGTATTCCTNTGGGCGNGNGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCAT > 1:1576422/1‑150 CACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCATC > 2:1400115/1‑150 CACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCATC > 2:1371187/1‑150 ACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAG > 2:1839347/1‑64 ACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAG < 1:1839347/64‑1 GTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCGGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCATCTGCTC > 1:788701/1‑150 GTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCATCTGCTC > 1:894148/1‑150 TGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGATGGCCTGTTCGCGGGCTTGCCCGCGCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4131014‑4131170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccacaggTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATCGCGCATCTGCTC < NC_002947/4131200‑4131052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |