| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4132690 | 94 (1.060) | 7 (0.080) | 7/236 | NT | 7.3% | coding (515/1206 nt) | PP_3636 | sulfonate ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 4132705 | 88 (1.040) | coding (500/1206 nt) | PP_3636 | sulfonate ABC transporter substrate‑binding protein | |||||
CTACCTTGAGGTTCTCGGCCAGTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4132538‑4132690‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacaACGGCCTGACGCCCGTGTCGAAGCCGGCCAATGCGCAACTGGCCGCCAACGAAGTCAACCTGCTGGTGCTGCCACCGTCCGACATGCCACCCGCTCTGGCCAGCAAGCGCATTGCCGGCTACATCGTTGCCGAGCCGTTCAACGCACTG < NC_002947/4132705‑4132557 CTACCTTGAGGTTCTCGGCCAGTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCG > 2:49178/1‑150 TTGAGGTTCTCGGCCAGTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTC > 1:107490/1‑144 TTGAGGTTCTCGGCCAGTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTC < 2:107490/144‑1 GCCAGTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACAACGGCCTGACGCCC < 1:49178/150‑1 GTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGAC‑ACGGCCTGACGCCCGTGTC < 1:765011/150‑1 GTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACAACGGCCTGACGCCCGTGTCGAA < 1:591454/150‑1 GCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACAACGGCCTGACGCCCGTGTCGAAGC < 1:594356/109‑1 GCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACAACGGCCTGACGCCCGTGTCGAAGC > 2:594356/1‑109 GCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACAACGGCCTGACGCCCGTG < 1:1594566/71‑1 GCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACAACGGCCTGACGCCCGTG > 2:1594566/1‑71 AACGGCCTGACGCCCGTGTCGAAGCCGGCCAATGCGCAACTGGCCGCCAACGAAGTCAACCTGCTGGTGCTGCCACCGTCCGACATGCCACCCGCTCTGGCCAGCAAGCGCATTGCCGGCTACATCGTTGCCGAGCCGTTCAACGCACTG < 2:679106/150‑1 CTACCTTGAGGTTCTCGGCCAGTGCGTTGAACGGCTCGGCAACGATGTAGCCGGCAATGCGCTTGCTGGCCAGAGCGGGTGGCATGTCGGACGGTGGCAGCACCAGCAGGTTGACTTCGTTGGCGGCCAGTTGCGCATTGGCCGGCTTCGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4132538‑4132690‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacaACGGCCTGACGCCCGTGTCGAAGCCGGCCAATGCGCAACTGGCCGCCAACGAAGTCAACCTGCTGGTGCTGCCACCGTCCGACATGCCACCCGCTCTGGCCAGCAAGCGCATTGCCGGCTACATCGTTGCCGAGCCGTTCAACGCACTG < NC_002947/4132705‑4132557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |