New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4248529 =92 (1.040)5 (0.060) 5/232 NT 5.4% coding (1542/2118 nt) PP_3724 acyl‑CoA synthetase
?NC_002947 4248582 = 90 (1.080)coding (1489/2118 nt) PP_3724 acyl‑CoA synthetase

GACCAGGGCGAGGCTGTGCGGGTACCGCTGTGCCCGCAGGCCCTCACGGGCGAAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4248684‑4248529
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagacCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGGGCCTGCGGGCACAGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCA  >  NC_002947/4248582‑4248729
                                                                                                                                                                                                                                                                                                                
GACCAGGGCGAGGCTGTGCGGGTACCGCTGTGCCCGCAGGCCCTCACGGGCGAAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTG                                                                                                                                                            <  2:484303/150‑1
 ACCAGGGCGAGGCTGTGCGGGTACCGCTGTGCCCGCAGGCCCTCACGGGCGAAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCTGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGG                                                                                                                                                           <  1:2292452/150‑1
   CAGGGCGAGGCTGTGCGGGTACCGCTGTGCCCGCAGGCCCTCACGGGCGAAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCA                                                                                                                                                         <  2:389152/150‑1
     GGGCGAGGCTGCGCAGGAACCGCTGTGCGAGCAGGCCATCAGTGGCTGAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGA                                                                                                                                                       <  2:1231978/150‑1
          AGGCTGTGCGGGTACCGCTGTGCCCGCAGGCCCTCACGGGCGAAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGCCCGAA                                                                                                                                                  <  2:66184/150‑1
                                                                                                  CTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGACCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGGGCCTGCGGGCACAGCGGTACCCGCACAGCC                                                          >  1:66823/1‑150
                                                                                                       GTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGACCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGGGCCTGCGGGCACAGCGGTACCCGCACAGCCTCGCC                                                     >  2:333758/1‑150
                                                                                                        TCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGACCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGG                                                                                        >  1:339868/1‑114
                                                                                                        TCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGACCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGG                                                                                        <  2:339868/114‑1
                                                                                                                          CGTGCTGAGTACGCCCGAACGCGCCGTGGCAGACCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGGGCCTGCGGGCACAGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGG                                  <  1:333758/150‑1
                                                                                                                                                         gcCCGAAGGCGCGCAGTGCCTGCTTGGATTGCCCTTCGTCCAACAGGCGGCTTTCTCCCGTGAGGGCCTGCTGGCACAGCAGTACCCGCACAGCCTCGTCCTTGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGGCCCC   <  2:252104/148‑1
                                                                                                                                                          ACCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGGGCCTGCGGGCACAGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCA  >  1:1322077/1‑150
                                                                                                                                                                                                                                                                                                                
GACCAGGGCGAGGCTGTGCGGGTACCGCTGTGCCCGCAGGCCCTCACGGGCGAAAGCCGACTGTTGGACGAATGGCAATCCAAGCAGGCCCTGCGCGCCTTCGGTCTGCCGGTGCCTGCGGGCGTGCTGAGTACGCCCGAACGCGCCGTGGCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4248684‑4248529
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagacCGAAGGCGCGCAGGGCCTGCTTGGATTGCCATTCGTCCAACAGTCGGCTTTCGCCCGTGAGGGCCTGCGGGCACAGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCA  >  NC_002947/4248582‑4248729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.