New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4291429 =	93 (1.050)	5 (0.060)	5/234	NT	5.3%	coding (1202/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4291454 =	90 (1.070)					coding (1177/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator

ACCGAAGACGGGCAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4291580‑4291429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCAGGAAACCCAGCTCGATCACCCCGTTGATCTGCCCGTC  >  NC_002947/4291454‑4291574                                                                                                                                                                                                                                                                                   ACCGAAGACGGGCAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTG                                                                                                                             <  1:1351384/150‑1  CCGAAGACGGGCAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTGG                                                                                                                            <  1:2173846/150‑1  CCGAAGACGGGCAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTGG                                                                                                                            <  2:2161944/150‑1   CGAAGACGGGCAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTGGC                                                                                                                           >  2:1921693/1‑150   CGAAGACGGACAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCGATCGAGAGGGCCCGTTATAGCCAGCGCCTGCAGGAGGTGCTGGC                                                                                                                           >  1:396109/1‑150              AGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTG                                                                                                                             <  1:2111697/137‑1              AGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTG                                                                                                                             >  2:2111697/1‑137                                         TCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCACTTCCTGCAGGCGCTGGCGATAACGGGCACTCTCGATGG                                                                                                      <  1:2104573/133‑1                                         TCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCACTTCCTGCAGGCGCTGGCGATAACGGGCACTCTCGATGG                                                                                                      >  2:2104573/1‑133                                                                                                                        CCGTTATCGCTAGCGCCTGCAGGAAGTGCTGGCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAA                                               >  1:681504/1‑109                                                                                                                        CCGTTATCGCTAGCGCCTGCAGGAAGTGCTGGCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAA                                               <  2:681504/109‑1                                                                                                                            TATCGCCAGCGCCTGCAGGAAGTGCTGGCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCAGGAAACCCAGCTCGATCACCCCGTTGATCTGCCCGTC  >  2:1540571/1‑150                                                                                                                                                    CTGGCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCA                                       >  1:840328/1‑89                                                                                                                                                    CTGGCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCA                                       <  2:840328/89‑1                                                                                                                                                       GCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCAGGAAACCCAGCTCGATCACCCCGTT              >  1:403337/1‑111                                                                                                                                                       GCGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCAGGAAACCCAGCTCGATCACCCCGTT              <  2:403337/111‑1                                                                                                                                                                                                                                                                                   ACCGAAGACGGGCAGATCAACGGGGTGATCGAGCTGGGTTTCCTGCGCCCCTTGCAAGAACGGGATGAAGAGCTGCTGGAGCGGGTCGGCGGCAATCTGGGCATGTCCATCGAGAGTGCCCGTTATCGCCAGCGCCTGCAGGAAGTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4291580‑4291429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcGATAACGGGCACTCTCGATGGACATGCCCAGATTGCCGCCGACCCGCTCCAGCAGCTCTTCATCCCGTTCTTGCAAGGGGCGCAGGAAACCCAGCTCGATCACCCCGTTGATCTGCCCGTC  >  NC_002947/4291454‑4291574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.