| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4545349 | 91 (1.030) | 12 (0.150) | 8/226 | NT | 12.0% | coding (501/1284 nt) | hyuC | bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase |
| ? | NC_002947 | = 4545362 | 92 (1.130) | coding (488/1284 nt) | hyuC | bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase | |||||
GCCGAGGACCACGCCGATGGTCTTGGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4545196‑4545349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaccctggCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGAGGACCAGGCCAA < NC_002947/4545362‑4545218 GCCGAGGACCACGCCGATGGTCTTGGCCTGGTCCTCAAGGTTCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACC < 1:57050/150‑1GCCGAGGACCACGCCGATGGTCTTGGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACC > 2:2016251/1‑150 CCGAGGACCACGCCGATGGTCTTGGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCC > 1:821623/1‑150 CCACGCCGATGGTCTTGGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAA > 1:261847/1‑150 TTGGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGG < 1:1884782/150‑1 gtCCTGCTCCTCAAGGATCGGCCCCTACTCGATATGCGCTTCGAAAGCCGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGGGT < 2:1039204/148‑1 GGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGGGT < 2:261847/150‑1 CTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGC > 2:2160005/1‑147 CTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGC < 1:2160005/147‑1 CTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACAC > 1:1033958/1‑98 CTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACAC < 2:1033958/98‑1 ATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCAGACACCCTGGCCAAGCGCG‑ATGCCCAGG > 1:1682613/1‑103 ATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCAGACACCCTGGCCAAGCGCG‑ATGCCCAGG < 2:1682613/103‑1 CCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGGGT < 1:1281111/99‑1 CCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGGCCAAGCGCG‑ATGCCCAGGGT > 2:1281111/1‑99 CAACGCTGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGA > 2:651768/1‑150 AACGCTGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGG > 2:1586860/1‑108 AACGCTGACACCCTGGGC‑ATCGCGCTTGGCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGG < 1:1586860/108‑1 ACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGAGGACCAGGCC > 1:2016251/1‑150 ACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCC > 1:2118309/1‑131 ACCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCC < 2:2118309/131‑1 CCCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGAGGACCAGGCCA > 1:1239615/1‑150 CCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGAGGACCAGGCCAA > 2:1523529/1‑150 CCTGGCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGAGGACCAGGCCAA > 2:1989818/1‑150 GCCGAGGACCACGCCGATGGTCTTGGCCTGGTCCTCAAGGATCGGCCCCTGCTCGATATGCGCTTCGAAATACGCCCCCACCGGGTGCCCCGACACAGCACGCGGACCGGCGTAGCCAATGGAGTTCAACGCTTCGCCAACGCTGACACCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4545196‑4545349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaccctggCCAAGCGCG‑ATGCCCAGGGTGTCAGCGTTGGCGAAGCGTTGAACTCCATTGGCTACGCCGGTCCGCGTGCTGTGTCGGGGCACCCGGTGGGGGCGTATTTCGAAGCGCATATCGAGCAGGGGCCGATCCTTGAGGACCAGGCCAA < NC_002947/4545362‑4545218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |