New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4605393 =	94 (1.060)	8 (0.100)	7/234	NT	8.8%	coding (763/1767 nt)	PP_4077	hypothetical protein
	?	NC_002947	4605420 =	77 (0.910)					coding (790/1767 nt)	PP_4077	hypothetical protein

CAGGTCGATGGGCTCGGCACTGTGCTTGAACAGGTTGACAGCCGGGGTGCAGAACAGGCTGAAATCTTCTGTGCCAACGCGAAGGGTGTCTGGCAGTTGACGCGTGAAATGGAACTCGATGCCCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4605545‑4605393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacagGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGCCCATCGACCTGGCCAGCGAGGCTGCCCAGGTCGA  >  NC_002947/4605420‑4605568                                                                                                                                                                                                                                                                                                                  CAGGTCGATGGGCTCGGCACTGTGCTTGAACAGGTTGACAGCCGGGGTGCAGAACAGGCTGAAATCTTCTGTGCCAACGCGAAGGGTGTCTGGCAGTTGACGCGTGAAATGGAACTCGATGCCCACCTGTGGGCAGGCTTGTGCC‑GG‑CCA                                                                                                                                                          >  2:1494607/1‑150    GTCGATGGGCTCGGCACTGTGCTTGAACAGGTTGACAGCCGGGGTGCAGAACAGGCTGAAATCTTCTGTGCCAACGCGAAGGGTGTCTGGCAGTTGACGCGTGAAATGGAACTCGATGCCCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAG                                                                                                                                                       <  2:2398381/150‑1                         CTTGAACAGGTTGACAGCCGGGGTGCAGAACAGGCTGAAATCTTCTGTGCCAACGCGAAGGGTGTCTGGCAGTTGACGCGTGAAATGGAACTCGATGCCCACCTGT‑GGCCGGCACAAGCCTGC‑CCACAGGTGGGCATCGAGTTCCAT                                                                                                                                     >  1:626055/1‑147                         CTTGAACAGGTTGACAGCCGGGGTGCAGAACAGGCTGAAATCTTCTGTGCCAACGCGAAGGGTGTCTGGCAGTTGACGCGTGAAATGGAACTCGATGCCCACCTGT‑GGCCGGCACAAGCC‑TGCCCACAGGTGGGCATCGAGTTCCAT                                                                                                                                     <  2:626055/147‑1                                                                                                                           CCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGC                                         <  1:221472/141‑1                                                                                                                           CCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGC                                         >  2:221472/1‑141                                                                                                                           CCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAA                                                                                           <  1:283223/91‑1                                                                                                                           CCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAA                                                                                           >  2:283223/1‑91                                                                                                                             ACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGCCCATCG                              >  1:1899237/1‑150                                                                                                                                  TGGGCAGGCTTGTGCC‑GG‑CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGCCCATCGACCTG                         <  2:1899237/150‑1                                                                                                                                                      CCACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGCCCATCGACCTGGCCAGCGAGGCTGCCCAG       >  2:316087/1‑150                                                                                                                                                        ACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGC                                    <  1:167974/119‑1                                                                                                                                                        ACAGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGC                                    >  2:167974/1‑119                                                                                                                                                          AGGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCAAAGAAGATTTCAGCATGACCTGCACCGCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGCCCATCGACCTGGCCAGCGAGGCTGCCCAGGTCG   >  1:1497695/1‑150                                                                                                                                                           GGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCACGTTGGAACCGACCATTTTAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAATCACAGTGCCGAGCCCATCGACCTGGCCAGCGAGGCTGCCCAGGTCGA  <  2:274501/150‑1                                                                                                                                                                                                                                                                                                                  CAGGTCGATGGGCTCGGCACTGTGCTTGAACAGGTTGACAGCCGGGGTGCAGAACAGGCTGAAATCTTCTGTGCCAACGCGAAGGGTGTCTGGCAGTTGACGCGTGAAATGGAACTCGATGCCCACCTGTGGGCAGGCTTGTGCC‑GG‑CCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4605545‑4605393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacagGTGGGCATCGAGTTCCATTTCACGCGTCAACTGCCAGACACCCTTCGCGTTGGCACAGAAGATTTCAGCCTGTTCTGCACCCCGGCTGTCAACCTGTTCAAGCACAGTGCCGAGCCCATCGACCTGGCCAGCGAGGCTGCCCAGGTCGA  >  NC_002947/4605420‑4605568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.