New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 464302095 (1.070)12 (0.150) 9/228 NT 11.6% intergenic (+20/‑160) PP_4107/PP_4108 LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
?NC_002947 = 4643043 95 (1.160)intergenic (+43/‑137) PP_4107/PP_4108 LysR family transcriptional regulator/4‑aminobutyrate aminotransferase

AAGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4642863‑4643020
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctctTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGTTGCTT  <  NC_002947/4643043‑4642895
                                                                                                                                                                                                                                                                                                                   
AAGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCC                                                                                                                                                               >  2:1736443/1‑150
 AGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCC                                                                                                                                                              <  1:1823436/150‑1
 AGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCC                                                                                                                                                              <  1:2329170/150‑1
 AGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCC                                                                                                                                                              <  1:855397/150‑1
 AGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCC                                                                                                                                                              >  1:87779/1‑150
      GTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCT                                                                                                                                                         <  2:2019960/150‑1
                                AAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCA                                                                                                                               >  1:945286/1‑150
                                            GCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCA                                                                                                                   <  1:1413576/150‑1
                                             CACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGACGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGCCCGGGGCAG                                                                                                                  <  2:1609212/150‑1
                                             CACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAG                                                                                                                  <  2:945286/150‑1
                                             CACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAG                                                                                                                  <  2:940658/150‑1
                                             CACGTCATCGCGCATGCCGTTCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAG                                                                                                                  <  2:136693/150‑1
                                                              CGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGG                                                                                                                      >  1:1031202/1‑129
                                                              CGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGG                                                                                                                      <  2:1031202/129‑1
                                                                                      GATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCG                                                                                                                        >  1:819358/1‑103
                                                                                      GATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCG                                                                                                                        <  2:819358/103‑1
                                                                                                             TCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTG‑‑CCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAAT                                                                                                           <  2:2191770/91‑1
                                                                                                             TCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTG‑‑CCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAAT                                                                                                           >  1:2191770/1‑91
                                                                                                                                                     CCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCG                                        >  1:1321964/1‑120
                                                                                                                                                     CCGGCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCG                                        <  2:1321964/120‑1
                                                                                                                                                      CGGCCTCTTCGCGGGCAAGTCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCC         >  1:1982511/1‑150
                                                                                                                                                        GCCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGT       >  1:2331010/1‑150
                                                                                                                                                         CCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGTT      <  1:311199/150‑1
                                                                                                                                                         CCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCT                                  >  1:976842/1‑122
                                                                                                                                                         CCTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCT                                  <  2:976842/122‑1
                                                                                                                                                          CTCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGTTG     <  2:161744/150‑1
                                                                                                                                                           TCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGTTGC    <  2:1048432/150‑1
                                                                                                                                                           TCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCG        <  2:1550989/146‑1
                                                                                                                                                           TCTTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCG        >  1:1550989/1‑146
                                                                                                                                                             TTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGTTGCTT  >  2:1778579/1‑150
                                                                                                                                                                                                                                                                                                                   
AAGCTGGTGGTGGCCTGGGACCACCCTGTGGCAAGCAACGGGAGGCACTTCATCGCGCATGCCGAGCATGCGGCCGAAGTGCCCAAGATCAGGGCCTTCGTGCAGTGGATCCGGGAGCGGGTGGCTGAAGGCGATTGATTTGACCTGCCCCGGCCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4642863‑4643020
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctctTCGCGGGCAAGCCCGCTCCTGCCAGAGGCCGGGGCAGGTCAAATCAATCGCCTTCAGCCACCCGCTCCCGGATCCACTGCACGAAGGCCCTGATCTTGGGCACTTCGGCCGCATGCTCGGCATGCGCGATGAAGTGCCTCCCGTTGCTT  <  NC_002947/4643043‑4642895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.