| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4673479 = | 98 (1.110) | 6 (0.070) | 6/240 | NT | 6.1% | coding (205/2073 nt) | PP_4137 | outer membrane siderophore receptor |
| ? | NC_002947 | 4673520 = | 88 (1.020) | coding (246/2073 nt) | PP_4137 | outer membrane siderophore receptor | |||||
CGAACATGGTGTAGACACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4673629‑4673479‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGGGGGCGCACGGTTCCGGTGTCTACACCATGTTCGACGGCCTGCCGTTGACCGGCCCGGGCGGCACGCCTTA > NC_002947/4673520‑4673666 CGAACATGGTGTAGACACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGC < 1:1370075/150‑1 GAACATGGTGTAGACACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCC > 2:1623188/1‑150 GAACATGGTGTAGACACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCC > 2:715654/1‑150 CACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGC > 1:1886959/1‑135 CACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGC < 2:1886959/135‑1 CCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCCAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACC < 1:502353/113‑1 CCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCCAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACC > 2:502353/1‑113 CCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCCAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGG < 1:1431977/121‑1 CCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCCAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGG > 2:1431977/1‑121 TGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCCAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGGGGGCGCACGGTTCCGGTGTCTACACCATGTTCGAC > 1:852730/1‑150 TAGGCCAGCACGTCCTGGTTGCTGGCCTACCAGCAAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGGGGGCGCACGGTTCCGGTGTCTACACCATGTTCGACGGC > 1:2370560/1‑150 GCCAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGGGGGCGCACGGGTCCGGTGTCTACACCATGTTCGGCGGTCGGCGGTTGACCGGCCCTTGCCGCACGCCCTA > 2:508483/1‑150 CGAACATGGTGTAGACACCGGAACCGTGCGCCCCCGGCGCACGGTTGAGGCCCGAGCCGCGTATCGACAGCTTGATGCCATCGTTACCTGCCGATTGGGCGAACACCCCTGGCTGGTAGGCCAGCACGTCCTGGTTGCTGGCCACTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4673629‑4673479‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGGGGTGTTCGCCCAATCGGCAGGTAACGATGGCATCAAGCTGTCGATACGCGGCTCGGGCCTCAACCGTGCGCCGGGGGCGCACGGTTCCGGTGTCTACACCATGTTCGACGGCCTGCCGTTGACCGGCCCGGGCGGCACGCCTTA > NC_002947/4673520‑4673666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |