| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4677752 = | 76 (0.860) | 6 (0.070) | 6/236 | NT | 8.0% | coding (868/2250 nt) | ldcC | lysine decarboxylase |
| ? | NC_002947 | 4677777 = | 65 (0.770) | coding (843/2250 nt) | ldcC | lysine decarboxylase | |||||
ACCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4677905‑4677752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaCAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGCATGCCAGACGATCTTGTTGGCCGTGGAGGTGCCATTGATGACGAAAAA > NC_002947/4677777‑4677923 ACCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTTGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTG < 2:830302/150‑1ACCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTG > 1:827162/1‑150ACCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTG > 1:987303/1‑150ACCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTG < 2:1630287/150‑1 CCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGG < 1:1003700/150‑1 TGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGG > 1:587581/1‑41 TGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGG < 2:587581/41‑1 CCGTTGTACCTGTGCCCGGAGCGCAACGAACTGGGCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGC > 1:932781/1‑136 CCGTTGTACCTGTGCCCGGAGCGCAACGAACTGGGCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGC < 2:932781/136‑1 CCTGTGCCCGGAGCGCAACGAACTGGGCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGCATGCCAGACGATCTTGTTGGCC > 2:1647488/1‑150 TGCCCGGAGCGCAACGAACTGGGCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGC > 1:2081509/1‑87 TGCCCGGAGCGCAACGAACTGGGCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGC < 2:2081509/87‑1 CCCGGAGCGCAACGAACTGGGCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGCATGCCAGACGATCTTGTTGGCCGTGGAG < 1:1647488/150‑1 GCACAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGCATGCCAGACGATCTTGTTGGCCGTGGAGATGCCATTGATGACGAAAAA > 2:927831/1‑150 ACCTCCACGGCCAACAAGATCGTCTGGCATGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGTGGTGCACGCGATCATCATGACGGGTGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4677905‑4677752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaCAGGTACAACGGGATGGCACCCGTCATGATGATCGCGTGCACCACCGACTTGTGGCAGTTGCGGTCCACCAGCACCAGGTCGTCACGGCCGACCATGGCATGCCAGACGATCTTGTTGGCCGTGGAGGTGCCATTGATGACGAAAAA > NC_002947/4677777‑4677923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |