| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4772452 = | 101 (1.140) | 6 (0.070) | 6/232 | NT | 6.1% | coding (6860/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4772493 = | 90 (1.080) | coding (6819/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
CTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4772603‑4772452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACCAC > NC_002947/4772493‑4772639 CTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCC > 2:1933279/1‑150CTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCC > 2:1521765/1‑150 TTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCA > 1:1298387/1‑150 TTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCA > 1:399776/1‑150 TTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCA < 1:2252963/150‑1 CCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCT > 2:643243/1‑135 CCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCT < 1:643243/135‑1 CTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCT > 1:1195469/1‑134 CTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCT < 2:1195469/134‑1 TTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCA < 2:2192405/94‑1 TTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCA > 1:2192405/1‑94 CACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCC > 1:1400130/1‑150 ACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCA > 2:1298755/1‑150 TGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGga > 1:1330760/1‑109 TGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCC < 2:1330760/111‑1 CAACGAAGAGCGTGAACGCGGCTTCG‑‑TTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTT > 2:1409439/1‑138 CAACGAAGAGCGTGAACGCGGCTTCG‑‑TTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTT < 1:1409439/138‑1 GCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACC < 2:1400130/150‑1 GCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACC > 2:355537/1‑150 CAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCACCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACCAC > 2:430064/1‑150 cGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAAT > 2:1658397/2‑129 AGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAAT < 1:1658397/129‑1 GTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGT < 1:5018/121‑1 GTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGT > 2:5018/1‑121 CTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGGCAGTTGCCACTGCCATTGCGTGAGCTGGACTGGCGCGGTCGTGGCGATTGCGCGCAGGCGCTGGAGGCACTGGCCAACGAAGAGCGTGAACGCGGCTTCGACCTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4772603‑4772452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACCAC > NC_002947/4772493‑4772639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |