| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4773140 = | 116 (1.310) | 11 (0.130) | 9/240 | NT | 9.9% | coding (6172/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4773185 = | 86 (1.000) | coding (6127/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
AGCAGGCCGAGCCGGGCAGCGAGGCGGGCCAGCGACTGCGTGAGCAACTGGCGCATTTCCTCGGTCAGGGCTTGCCCGATTACATGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4773289‑4773140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCCCACCAGTTGCTTGCCGC > NC_002947/4773185‑4773331 AGCAGGCCGAGCCGGGCAGCGAGGCGGGCCAGCGACTGCGTGAGCAACTGGCGCATTTCCTCGGTCAGGGCTTGCCCGATTACATGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCA > 2:170745/1‑150 CTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAG > 1:222128/1‑98 CTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAG < 2:222128/98‑1 TCGCCAACTTGCCGGTCTCCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGG > 1:1868174/1‑150 GCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAG < 1:77775/86‑1 GCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAG > 2:77775/1‑86 AACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCA < 2:898193/147‑1 AACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCATGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCA > 1:898193/1‑147 CTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGC > 1:2306939/1‑88 CTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGC < 2:2306939/88‑1 AGTTGGCGCGCAGCCTCAGGTGCCCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCCCACCAGTT < 1:2089162/150‑1 AGTTGGCGCGCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCCCACCAGTT < 2:1868174/150‑1 GCAGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCCGACCAGTTGCTTGCCGC > 1:526144/1‑150 AGCAGGCCGAGCCGGGCAGCGAGGCGGGCCAGCGACTGCGTGAGCAACTGGCGCATTTCCTCGGTCAGGGCTTGCCCGATTACATGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4773289‑4773140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaGCATCAGGTGCGCCGGCACCATGTAATCGGGCAAGCCCTGACCGAGGAAATGCGCCAGTTGCTCACGCAGTCGCTGGCCCGCCTCGCTGCCCGGCTCGGCCTGCTCGGCAGCCATCGGCACCACATAGCCCACCAGTTGCTTGCCGC > NC_002947/4773185‑4773331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |