New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4792331 | 82 (0.930) | 4 (0.050) | 4/238 | NT | 5.2% | coding (1554/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4792360 | 68 (0.790) | coding (1525/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
CCAACCAACAGGTTCACCGAGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4792179‑4792331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcGTGACGGCCTTTGCCAAGGCGCAGCCGCAGCGCATCGCCGTTGTCAGTGCCGATGGCTCGCTCAGTTACGGCGAGCTCGACGCGCGCGCCGATCAGCTGTGTGCCCAGCTGCAAGCGCACGGTGTGGTCGCCGATCAGCCGGTGGGCCT < NC_002947/4792360‑4792212 CCAACCAACAGGTTCACCGAGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATG > 2:2297532/1‑150 CAACCAACAGGTTCACCGAGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGC > 1:2154222/1‑150 AACCAACAGGTTCACCGAGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCG > 2:1254416/1‑150 AACCAACAGGTTCACCGAGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCG > 2:930251/1‑150 TGAGCGAGCCATCGGCACTGACAACGGCGATGCGCGTGACGGCCTTTGCCAAGGCGCAGCCGCAGC > 1:2093515/1‑66 TGAGCGAGCCATCGGCACTGACAACGGCGATGCGCGTGACGGCCTTTGCCAAGGCGCAGCCGCAGC < 2:2093515/66‑1 CGAGCCATCGGCACTGACAACGGCGATGCGCGTGACGGCCTTTGCCAAGGCGCAGCCGCAG < 1:922722/61‑1 CGAGCCATCGGCACTGACAACGGCGATGCGCGTGACGGCCTTTGCCAAGGCGCAGCCGCAG > 2:922722/1‑61 CGTGACGGCCTTTGCCAAGGCGCAGCCGCAGCGCATCGCCGTTGTCACTGCCGATGGCTCGCTCAGTTACGGCGAGCTCGACGCGCGCGCCGATCAGCTGTGTGCCCAGCTGCAAGCGCACGGTGTGGTCGCCGATCAGCCGGTGGGCCT < 1:1468475/150‑1 CCAACCAACAGGTTCACCGAGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4792179‑4792331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcGTGACGGCCTTTGCCAAGGCGCAGCCGCAGCGCATCGCCGTTGTCAGTGCCGATGGCTCGCTCAGTTACGGCGAGCTCGACGCGCGCGCCGATCAGCTGTGTGCCCAGCTGCAAGCGCACGGTGTGGTCGCCGATCAGCCGGTGGGCCT < NC_002947/4792360‑4792212 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |