| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4824649 = | 109 (1.230) | 6 (0.070) | 6/234 | NT | 5.6% | coding (6586/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4824674 = | 100 (1.190) | coding (6561/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
CCGCAACACCGCCTGTGCGAACTGCCAATGCTGAGCAGTGCCGAGCAACAAGTGCTTACAGGCCAGTTGCAGGGCGAACACGATTTCGACCTTGGCCAGACCCTCCATGGTCTGTTCGCCGCCCAGGCCGCGCGCACGCCACAGGCTGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4824802‑4824649‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCAGTTCGCACAGGCGGTGTTGCGGGTTGTCGAGCAAACCGAC > NC_002947/4824674‑4824820 CCGCAACACCGCCTGTGCGAACTGCCAATGCTGAGCAGTGCCGAGCAACAAGTGCTTACAGGCCAGTTGCAGGGCGAACACGATTTCGACCTTGGCCAGACCCTCCATGGTCTGTTCGCCGCCCAGGCCGCGCGCACGCCACAGGCTGGa > 1:2133720/1‑149CCGCAACACCGCCTGTGCGAACTGCCAATGCTGAGCAGTGCCGAGCAACAAGTGCTTACAGGCCAGTTGCAGGGCGAACACGATTTCGACCTTGGCCAGACCCTCCATGGTCTGTTCGCCGCCCAGGCCGCGCGCACGCCACAGGCTGGC > 2:1962299/1‑150CCGCAACACCGCCTGTGCGAACTGCCAATGCTGAGCAGTGCCGAGCAACAAGTGCTTACAGGACAGTTGCAGGGCGAACACGATTTCGACCTTGGCCAGACCCTCCATGGTCTGTTCGCCGCCCAGGCCGCGCGCACGCCACAGGCTGGC > 2:560318/1‑150 CCCAGGCCGCGCGCACGCCACAGGCTGGCGCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCA < 1:598103/140‑1 CCCAGGCCGCGCGCACGCCACAGGCTGGCGCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCA > 2:598103/1‑140 CCAGGCCGCGCGCACGCCACAGGCTGGCGCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAAT > 1:1326968/1‑79 CCAGGCCGCGCGCACGCCACAGGCTGGCGCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAAT < 2:1326968/79‑1 CGCGCGCACGCCACAGGCTGGCGCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACT < 1:1772588/91‑1 CGCGCGCACGCCACAGGCTGGCGCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACT > 2:1772588/1‑91 GCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGC < 1:1018371/72‑1 GCGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGC > 2:1018371/1‑72 CGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCAGTTCGCACAGGCGGTGTTGCGGGTTGTCGAGCAAACCGAC < 2:661444/150‑1 CGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCAGTTCGCACAGGCGGTGTTGCGGGTTGTCGAGCAAAC < 1:985402/146‑1 CGCGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCAGTTCGCACAGGCGGTGTTGCGGGTTGTCGAGCAAAC > 2:985402/1‑146 CCGCAACACCGCCTGTGCGAACTGCCAATGCTGAGCAGTGCCGAGCAACAAGTGCTTACAGGCCAGTTGCAGGGCGAACACGATTTCGACCTTGGCCAGACCCTCCATGGTCTGTTCGCCGCCCAGGCCGCGCGCACGCCACAGGCTGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4824802‑4824649‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcGGCCTGGGCGGCGAACAGACCATGGAGGGTCTGGCCAAGGTCGAAATCGTGTTCGCCCTGCAACTGGCCTGTAAGCACTTGTTGCTCGGCACTGCTCAGCATTGGCAGTTCGCACAGGCGGTGTTGCGGGTTGTCGAGCAAACCGAC > NC_002947/4824674‑4824820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |