| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4921342 | 79 (0.890) | 6 (0.070) | 5/234 | NT | 7.2% | coding (1706/2682 nt) | PP_4330 | toxin‑like protein |
| ? | NC_002947 | = 4921350 | 79 (0.940) | coding (1714/2682 nt) | PP_4330 | toxin‑like protein | |||||
GGCGAACTGGACGACCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4921188‑4921342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgct‑GCCTGTCGAGCGCCACAAGGTCACGGCTGCCAGGCACTGCGATGTAGGCTTGCGGCTCGACCTCGTTGACGGTTTCCTTGATGATGAAAGCGTCGTGCTCCAGGTCATAGACCACGCGTGCATTGTAGGTTTCGATGCTGCATTCCA < NC_002947/4921350‑4921204 GGCGAACTGGACGACCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTG < 2:792238/150‑1 GCGAACTGGACGACCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGG < 1:288815/150‑1 CGAACTGGACGACCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGC < 1:918718/150‑1 AACTGGACGACCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGC > 2:2072319/1‑150 CCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑GCCTGTCGA > 1:1592046/1‑150 AGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑GCCTGTCGAGCGCCACAAG < 2:1592046/150‑1 GCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGG > 1:2288228/1‑109 GCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGG < 2:2288228/109‑1 TTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑GCCTGTCGAGCGCCACAAGGTCA > 2:758823/1‑104 AAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑GCCTGTCGAGCGCCACAAG < 1:97507/86‑1 AAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑GCCTGTCGAGCGCCACAAG > 2:97507/1‑86 TGACCTTGTGGCGCTCGACAGGC‑AGCGCCACAAGGTCACGGCTGCCAGGCACTGCGATGTAGGCTTGCGGCTCGACCTCGTTGACGGTTTCCTTGATGATGAAA > 1:758823/1‑104 GCT‑GCCTGTCGAGCGCCACAAGGTCACGGCTGCCAGGCACTGCGATGTAGGCTTGCGGCTCGACCTCGTTGACGGTTTCCTTGATGATGAAAGCGTCGTGCTCCAGGTCATAGACCACGCGTGCATGGTAGGTTTCGATGCTGCATTCCA > 2:945134/1‑150 GGCGAACTGGACGACCTGGAATGCAGCATCGAAACCTACAATGCACGCGTGGTCTATGACCTGGAGCACGACGCTTTCATCATCAAGGAAACCGTCAACGAGGTCGAGCCGCAAGCCTACATCGCAGTGCCTGGCAGCCGTGACCTTGTGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4921188‑4921342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgct‑GCCTGTCGAGCGCCACAAGGTCACGGCTGCCAGGCACTGCGATGTAGGCTTGCGGCTCGACCTCGTTGACGGTTTCCTTGATGATGAAAGCGTCGTGCTCCAGGTCATAGACCACGCGTGCATTGTAGGTTTCGATGCTGCATTCCA < NC_002947/4921350‑4921204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |