New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5036635	NA (NA)	5 (0.060)	4/228	NT	NA	coding (78/336 nt)	PP_4442	transposase
	?	NC_002947	= 5036691	NA (NA)					coding (134/336 nt)	PP_4442	transposase

TGACCGGGCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5036479‑5036635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcccggCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG  <  NC_002947/5036691‑5036544                                                                                                                                                                                                                                                                                                                   TGACCGGGCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATT                                                                                                                                                             >  2:1687769/1‑150    CCGGGCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGC                                                                                                                                                          >  1:644511/1‑150      GGGCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCTCGCCGGCACCGAAACGGCATTGGCCC                                                                                                                                                        >  1:159432/1‑150      GGGCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCC                                                                                                                                                        >  2:2359193/1‑150        GCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTtgagcgg                                                                                                                                                      >  2:1942110/1‑143        GCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGG                                                                                                                                                      >  2:2165961/1‑150        GCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGG                                                                                                                                                      <  1:2173188/150‑1                    GGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGCGCTTGCCGCAC                                                                                                                                          >  2:622408/1‑150                                                           ATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATT                                                                                                                                                             <  1:1322833/92‑1                                                           ATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATT                                                                                                                                                             >  2:1322833/1‑92                                                                      CTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGC                                                                                        <  1:1669537/150‑1                                                                          CGCTCACTGATCCGCATCGATGCGATCTGGCTGGCCACCGCGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAAT                                                                                    <  1:622408/150‑1                                                                                                       GCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTC                                                                            >  1:1850550/1‑129                                                                                                       GCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTC                                                                            <  2:1850550/129‑1                                                                                                                                                     TTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGA         <  1:367954/150‑1                                                                                                                                                     TTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGA         <  1:54917/150‑1                                                                                                                                                     TTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGA         <  1:690145/150‑1                                                                                                                                                       GGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAA                                                                                     <  1:1881394/72‑1                                                                                                                                                       GGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAA                                                                                     >  2:1881394/1‑72                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCC    >  2:652513/1‑150                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCC    >  1:1243165/1‑150                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCC    >  2:2167484/1‑150                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCC    >  1:524110/1‑150                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACA       <  2:1582684/147‑1                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACA       >  1:1582684/1‑147                                                                                                                                                          CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACACGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGGTTGTCAGATCGCATCGATGCGGCTCATTGAGCGACAGCC    >  1:22027/1‑150                                                                                                                                                           CGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCC   >  1:1687769/1‑150                                                                                                                                                           CGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCC   >  2:1629153/1‑150                                                                                                                                                            GGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG  <  2:314087/150‑1                                                                                                                                                                                                                                                                                                                   TGACCGGGCAAGTGATCACGGTGAAATGGCCAACCTCAGATCCTGAGGGCTGCGCGCAATTTATCCGGGCTGTCGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5036479‑5036635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcccggCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG  <  NC_002947/5036691‑5036544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.