New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 525791885 (0.960)16 (0.200) 13/218 NT 17.1% intergenic (‑69/+75) PP_4634/PP_4635 alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
?NC_002947 = 5257961 80 (1.020)intergenic (‑112/+32) PP_4634/PP_4635 alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase

GTTGGGCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5257759‑5257918
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAA‑TCTTTGCTAGTTTTGGCGCACAACAACAGGACATGCGCCATGAGTAGCCTCATCCAACCCGCTACCCCATTTC  <  NC_002947/5257961‑5257816
                                                                                                                                                                                                                                                                                                                   
aTTGGGCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCC                                                                                                                                                               >  2:477278/2‑150
     GCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTC                                                                                                                                                          >  1:1036372/1‑150
       GTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGC                                                                                                                                                        >  1:1737327/1‑150
        TGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCG                                                                                                                                                       >  1:299777/1‑150
         GGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGG                                                                                                                                                      <  1:772372/150‑1
         GGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGG                                                                                                                                                      <  2:962623/150‑1
         GGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGG                                                                                                                                                      <  1:1482972/150‑1
                       CCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCgaag                                                                                                                                        <  1:2094275/150‑5
                                       CGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGG                                                                                                                                                      >  1:2065570/1‑120
                                       CGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGG                                                                                                                                                      <  2:2065570/120‑1
                                         TCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCCACAGGTTCTCCCCATGTA                                                                                                                      <  2:1737327/150‑1
                                          CGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAG                                                                                                                     <  1:1344510/150‑1
                                           gaCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAGCCCGCTCCCACAGGTTCTCCCCCTGTAGG                                                                                                                    >  1:696442/3‑150
                                               GCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCG                                                                                                                <  2:1036372/150‑1
                                                               GGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGA                                                                                                <  2:696442/150‑1
                                                                                         ATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAA‑TCTTTG                                                                     >  1:673176/1‑150
                                                                                         ATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAA‑TCTTTG                                                                     <  2:673176/150‑1
                                                                                                      TGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCC                                                                                                       >  1:1795679/1‑104
                                                                                                      TGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCC                                                                                                       <  2:1795679/104‑1
                                                                                                          GTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGTTCTCCCCCTGTAGGAGCGGGTTCACC                                                                                                        <  1:1425116/99‑1
                                                                                                          GTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGTTCTCCCCCTGTAGGAGCGGGTTCACC                                                                                                        >  2:1425116/1‑99
                                                                                                                   CAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACC                                                                                                        <  2:692740/90‑1
                                                                                                                   CAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACC                                                                                                        >  1:692740/1‑90
                                                                                                                             AAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCTCCCCCTGTAGGAGCGG                                                                                                               >  1:678091/1‑73
                                                                                                                             AAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCTCCCCCTGTAGGAGCGG                                                                                                               <  2:678091/73‑1
                                                                                                                                                  GGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAA‑TCTTTGCTAGTTTTGGCGCACAACAACAGGACATGCGCCATGAGTAGCCTCATCCAACCCGCT            >  2:1315936/1‑150
                                                                                                                                                   GCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAA                                                                                                  <  1:79921/64‑1
                                                                                                                                                   GCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAA                                                                                                  >  2:79921/1‑64
                                                                                                                                                         TCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAAGTCGTT‑CTAGCTTTGTCGCACAACAACAGGACATGCGCCATGAGTAGCCTCATCAAACCCGCTACCCCAT     >  1:1353828/1‑150
                                                                                                                                                            CGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAA‑TCTTTGCTAGTTTTGGCGCACAACAACAGGACATGCGCCATGAGTAGCCTCATCCAACCCGCTACCCCATTTC  <  1:1315936/150‑1
                                                                                                                                                                                                                                                                                                                   
GTTGGGCGTGGCGCCAGCAGAAGCCGCCGAGGCTGTATCCGTCGGCCGCGGGGTGGCGAAATGGGGTAGCGGGTTGGATGAGGCTACTCATGGCGCATGTCCTGTTGTTGTGCGCCAAAACTAGCAAAGATTTTGTAGCCTGTACTGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5257759‑5257918
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTACAAAA‑TCTTTGCTAGTTTTGGCGCACAACAACAGGACATGCGCCATGAGTAGCCTCATCCAACCCGCTACCCCATTTC  <  NC_002947/5257961‑5257816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.