New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5437693 =	87 (0.980)	7 (0.080)	6/232	NT	8.5%	noncoding (253/254 nt)	PP_mr57	P24 ncRNA
	?	NC_002947	5437717 =	68 (0.810)					noncoding (229/254 nt)	PP_mr57	P24 ncRNA

CGACGCGCCCTAGGCGGGCGGTCGCGGCCGGCCATCCAACAGGATCTGCAGGCCCCCGGGCTACACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGGCC‑CTGTGGTCTCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5437847‑5437693 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcccttCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCG  >  NC_002947/5437717‑5437864                                                                                                                                                                                                                                                                                                                  CGACGCGCCCTAGGCGGGCGGTCGCGGCCGGCCATCCAACAGGATCTGCAGGCCCCCGGGCTACACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGGCC‑CTGTGGTCT                                                                                                                                                           <  1:985156/150‑1                                       ACAGGATCTGCAGGCCCCCGGGCTACACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGGCC‑CTGTGGTCTC                                                                                                                                                          <  2:767346/113‑1                                       ACAGGATCTGCAGGCCCCCGGGCTACACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGGCC‑CTGTGGTCTC                                                                                                                                                          >  1:767346/1‑113                                                                 ACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGACCACAG‑GGCCTCCCTTCAGGAATTGTC                                                                                                                                           <  1:1688094/102‑1                                                                 ACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGACCACAG‑GGCCTCCCTTCAGGAATTGTC                                                                                                                                           >  2:1688094/1‑102                                                                                                                                 CTGAAGGGAGGCC‑CTGTGGTCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGG                           >  2:800372/1‑150                                                                                                                                 CTGAAGGGAGGCC‑CTGTGGTCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTA                                                                                <  1:2838/97‑1                                                                                                                                 CTGAAGGGAGGCC‑CTGTGGTCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTA                                                                                >  2:2838/1‑97                                                                                                                                  TGAAGGGAGGCC‑CTGTGGTCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCATCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTT                                                        >  1:1317631/1‑120                                                                                                                                  TGAAGGGAGGCC‑CTGTGGTCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCATCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTT                                                        <  2:1317631/120‑1                                                                                                                                                      CTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGG                          >  2:1138547/1‑131                                                                                                                                                      CTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGG                          <  1:1138547/131‑1                                                                                                                                                      CTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTACTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACT          >  2:308582/1‑147                                                                                                                                                      CTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTACTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACT          <  1:308582/147‑1                                                                                                                                                      CTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTGGGGGGGCTGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACTGAT       >  1:665683/1‑150                                                                                                                                                          CTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCC   >  2:1645587/1‑150                                                                                                                                                           TTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCG  >  2:37072/1‑150                                                                                                                                                                                                                                                                                                                  CGACGCGCCCTAGGCGGGCGGTCGCGGCCGGCCATCCAACAGGATCTGCAGGCCCCCGGGCTACACACCCTCCAGAAGACGGTGTGAGGTGAGCCGGCGCCACAAGTGCCGAGCACGGACGACAATTCCTGAAGGGAGGCC‑CTGTGGTCTCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5437847‑5437693 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcccttCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACCGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCG  >  NC_002947/5437717‑5437864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.