New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5506637	36 (0.410)	18 (0.270)	15/188	NT	35.8%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	37 (0.550)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

TGGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5506461‑5506637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggtaaacccgctcctacAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGGA  <  NC_002947/5506650‑5506504                                                                                                                                                                                                                                                                                                                                       gGGAGGGCGGCAGTGGCCGGGATGCTGGTGCTGGGGGTGATGCTCCCGCGTGTGGGCGTTTCGATGGTGGTGCTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGTTGG                                                                                                                                                                                 <  2:732009/149‑1  GGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGC                                                                                                                                                                                <  2:2388355/150‑1     ggggGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTC                                                                                                                                                                             <  1:1459728/146‑1        CGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTC                                                                                                                                                                          <  2:2259526/150‑1           CAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCG                                                                                                                                                                       >  2:313822/1‑150            AGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                      <  1:1924676/150‑1            AGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                      <  1:1413423/150‑1              TGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGT                                                                                                                                                                    >  2:1656114/1‑150                 CCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAA                                                                                                                                                                 >  1:1581260/1‑150                  CGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAC                                                                                                                                                                <  1:2255018/150‑1                  CGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAC                                                                                                                                                                >  1:2134544/1‑150                   GTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACC                                                                                                                                                               >  2:1517448/1‑150                   GTGATGCGGGTGCT‑GGGGTGGTGTGCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGGGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCC                                                                                                                                                              <  2:384533/150‑1                          TGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCT                                                                                                                                                        >  1:614035/1‑150                                 GGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                      <  2:547361/129‑1                                 GGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                      >  1:547361/1‑129                                    GGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGT                                                                                                                                              >  1:1175346/1‑150                                            TCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTA                                                                                                                                     <  1:1371410/150‑1                                               cgtTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGA                                                                                                                                  <  2:742766/147‑1                                                   ccTGGCGGTGTCGATGGTGGTGATGTGGGGGGTCGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGCTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGG                                                                                                                              <  1:2164660/148‑1                                                   GGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGG                                                                                                                              <  2:1175346/150‑1                                                   GGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGG                                                                                                                              <  2:1335938/150‑1                                                    GTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGG                                                                                                                             <  1:313822/150‑1                                                            GTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAG                                                                                                                                    >  2:1165116/1‑135                                                            GTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAG                                                                                                                                    <  1:1165116/135‑1                                                                    TGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGA                                                                                                                                  <  1:639335/129‑1                                                                    TGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGA                                                                                                                                  >  2:639335/1‑129                                                                            TGGGGGGCGGATAGTTTGGTGGTGATGCCCCGCCGGGTCTTGGACAGGGCTTGAGCCTTGTGTTCCCGGTACTGGCTTCTTCGCGGGTAAACCCGCGCTTACAACGCGGGC‑TCTCTTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA                                                                                                     <  1:119244/150‑1                                                                                 GGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCG                                                                                                                                                             <  1:858540/90‑1                                                                                 GGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCG                                                                                                                                                             >  2:858540/1‑90                                                                                                              GGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGC                                                                                                                                <  2:153922/89‑1                                                                                                              GGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGC                                                                                                                                >  1:153922/1‑89                                                                                                                       CCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGG                                                                                                                              >  2:1601440/1‑82                                                                                                                       CCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGG                                                                                                                              <  1:1601440/82‑1                                                                                                                                  GCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGA                                                                                                                                  >  1:115220/1‑67                                                                                                                                  GCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGA                                                                                                                                  <  2:115220/67‑1                                                                                                                                                      GCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACC                           >  1:2113692/1‑150                                                                                                                                                      GCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAA                                                                                    <  2:999572/93‑1                                                                                                                                                      GCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAA                                                                                    >  1:999572/1‑93                                                                                                                                                        CTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCG‑CGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCC                                          <  2:1616515/133‑1                                                                                                                                                        CTCTTCGCGGGTAAACCCGCTCCTACGA‑GGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCC                                          >  1:1616515/1‑133                                                                                                                                                        CTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTCCGGGGACACCTTCCCGCGAATAGGCCAGCACCGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCAC                         <  1:2341823/150‑1                                                                                                                                                         TCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTAC                                                                                                                        <  1:1563854/54‑1                                                                                                                                                         TCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTAC                                                                                                                        >  2:1563854/1‑54                                                                                                                                                         TCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTA                                                                                                                                     <  1:883691/41‑1                                                                                                                                                         TCTTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTA                                                                                                                                     >  2:883691/1‑41                                                                                                                                                           TTCGCGGGTAAACCCGCTCCTACACCGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGC                                                                            >  2:353538/1‑96                                                                                                                                                           TTCGCGGGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGC                                                                            <  1:353538/96‑1                                                                                                                                                                 GGTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCCTCGCCAC                >  2:743802/1‑150                                                                                                                                                                  GTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATC                                           >  2:2096326/1‑122                                                                                                                                                                  GTAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATC                                           <  1:2096326/122‑1                                                                                                                                                                   TAAACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCC              <  1:306008/150‑1                                                                                                                                                                      ACCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCA           >  2:2407858/1‑150                                                                                                                                                                       CCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAG                                                                                                    <  2:2003819/60‑1                                                                                                                                                                       CCCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAG                                                                                                    >  1:2003819/1‑60                                                                                                                                                                        CCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACC         >  1:1517448/1‑150                                                                                                                                                                        CCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACC         >  1:1656114/1‑150                                                                                                                                                                        CCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGC                                                                            >  1:1573031/1‑83                                                                                                                                                                        CCGCTCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGC                                                                            <  2:1573031/83‑1                                                                                                                                                                            TCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTG                                                                              <  2:1921863/77‑1                                                                                                                                                                            TCCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTG                                                                              >  1:1921863/1‑77                                                                                                                                                                             CCTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACACGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTAGCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGG    <  1:2295990/150‑1                                                                                                                                                                              CTACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGG   >  2:1581260/1‑150                                                                                                                                                                               TACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGGA  >  1:755212/1‑150                                                                                                                                                                               TACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACA                                                                                              >  2:226286/1‑58                                                                                                                                                                               TACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACA                                                                                              <  1:226286/58‑1                                                                                                                                                                                ACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGAC                  <  1:1063215/133‑1                                                                                                                                                                                ACAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGAC                  >  2:1063215/1‑133                                                                                                                                                                                                                                                                                                                                       TGGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5506461‑5506637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggtaaacccgctcctacAACGCGGTC‑CCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGGA  <  NC_002947/5506650‑5506504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.