New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5585727 =	91 (1.030)	6 (0.070)	6/234	NT	6.3%	coding (56/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5585764 =	91 (1.080)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A

CCGTACTGCTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5585881‑5585727 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgaGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACCACGATG  >  NC_002947/5585764‑5585910                                                                                                                                                                                                                                                                                                                CCGTACTGCTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTG                                                                                                                                                          <  1:684548/150‑1  CGTACTGCTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGG                                                                                                                                                         >  2:2136263/1‑150   GTACTGCTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGC                                                                                                                                                        >  2:1214482/1‑150   GTACTGCTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGC                                                                                                                                                        <  2:2009677/150‑1         CTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGcctt                                                                                                                                                  >  2:1513131/1‑146                                                         ACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGG                                                                                                                                                         <  1:270410/95‑1                                                         ACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGG                                                                                                                                                         >  2:270410/1‑95                                                                                                             TCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGG                                                                          <  1:1515065/122‑1                                                                                                             TCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGG                                                                          >  2:1515065/1‑122                                                                                                                       TCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAG                                                               <  1:2127246/123‑1                                                                                                                       TCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAG                                                               >  2:2127246/1‑123                                                                                                                               GACGGCGTCGAACGCCGCTCGCTGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGC                                                                                     >  1:1465231/1‑93                                                                                                                               GACGGCGTCGAACGCCGCTCGCTGGCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGC                                                                                     <  2:1465231/93‑1                                                                                                                                                       GCTGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACCACGA    <  2:2189319/150‑1                                                                                                                                                         TGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACCACGATG  <  1:1052443/150‑1                                                                                                                                                         TGAGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACCACGATG  <  2:923332/150‑1                                                                                                                                                                                                                                                                                                                CCGTACTGCTGGGCATGAGTGCCCTGCAACAACTTGAATTTACCCAGCGCGGTGGCACCATGCTGCTGCGCCAGAACCTGAAATAATGACGAGGCCCGCATGAGCGACTCACTGGAACTCAGCCTGGACGGCGTCGAACGCCGCTCGCTGGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5585881‑5585727 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgaGTTCCAGTGAGTCGCTCATGCGGGCCTCGTCATTATTTCAGGTTCTGGCGCAGCAGCATGGTGCCACCGCGCTGGGTAAATTCAAGTTGTTGCAGGGCACTCATGCCCAGCAGTACGGTGGACCCATCCAGGCCCGGCACCACGATG  >  NC_002947/5585764‑5585910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.