New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5840321	93 (1.050)	8 (0.090)	6/240	NT	8.3%	coding (316/855 nt)	sseA	3‑mercaptopyruvate sulfurtransferase
	?	NC_002947	= 5840342	87 (1.010)					coding (295/855 nt)	sseA	3‑mercaptopyruvate sulfurtransferase

AGCTTCGCGTCAGGTTCACCACTGAAAGTGCCCTCACGTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5840170‑5840321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCCGGCGCCTTTGCCGCCCGCGCCTGGTGGCTACTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGGCACGCAGCGAGCCTGCCGTTGAGCCTGGACCCTCCACCCAAACGTGAGGGCACT  <  NC_002947/5840342‑5840196                                                                                                                                                                                                                                                                                                             AGCTTCGCGTCAGGTTCACCACTGAAAGTGCCCTCACGTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAG                                                                                                                                                       <  1:1994372/150‑1                        GAAAGTGCCCTCACGTTTGGGTGGAGGGTCCAGGCTCATCGCGAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGCGCCGGCGCCTTTGCCGCCCGC                                                                                                                                <  1:634768/150‑1                         AAAGTGCCCTCACGTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCA‑‑‑‑‑‑CCCGGCGCCTTTGCCGCCCGCGCCTGGT                                                                                                                         <  1:247974/150‑1                         AAAGTGCCCTCACGTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCA‑‑‑‑‑‑CCCGGCGCCTTTGCCGCCCGCGCCTGGT                                                                                                                         <  1:248196/150‑1                                      GTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAG                                                                                                                                                       <  1:445295/113‑1                                      GTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAG                                                                                                                                                       >  2:445295/1‑113                                                                                 CCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGCCCCGGCGCCTTTGCCGCCCGCGCCT                                                                                                                            <  1:794741/97‑1                                                                                 CCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGCCCCGGCGCCTTTGCCGCCCGCGCCT                                                                                                                            >  2:794741/1‑97                                                                                  CAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGCCCCGGCGCCTTTGCCGCCCGCGCCTGGT                                                                                                                         <  1:360387/99‑1                                                                                  CAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGCCCCGGCGCCTTTGCCGCCCGCGCCTGGT                                                                                                                         >  2:360387/1‑99                                                                                                                                   GCCAGACCAGTAGCCACCAGGCGCGGGCGGCAAAGGCGCCGGGGCCTGGTGGCTACTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGGCACGCAGCGAGCCTGCCGTTGAGCCTGGACCCTCC                     >  2:1404445/1‑150                                                                                                                                                     cgcCCCCGGCGCCTTTGCCGCCCGCGCCTGGTGGCTCCTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGGCACGCAGCGAGCCTGCCGTTGAGCCTGGACCCTCCACCCAAACGTGAGGGCAC   <  1:510197/147‑1                                                                                                                                                      GGCCCCGGCGCCTTTGCCGCCCGCGCCTGGTGGCTACTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGGCACGCAGCGAGCCTGCCGTTGAGCCTGGACCCTCCACCCAAACGTGAGGGCACT  >  1:1691879/1‑150                                                                                                                                                        CCCCGGCGCCTTTGCCGCCCGCGCCTGGTGGCTACTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGG                                                        <  1:2389139/94‑1                                                                                                                                                        CCCCGGCGCCTTTGCCGCCCGCGCCTGGTGGCTACTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGG                                                        >  2:2389139/1‑94                                                                                                                                                                                                                                                                                                             AGCTTCGCGTCAGGTTCACCACTGAAAGTGCCCTCACGTTTGGGTGGAGGGTCCAGGCTCAACGGCAGGCTCGCTGCGTGCCAGGCCTTCAGGCCACCGTCGAGAATCGCCACACCACTGCGCTTGCCCAGCCAGACCAGTAGCCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5840170‑5840321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCCGGCGCCTTTGCCGCCCGCGCCTGGTGGCTACTGGTCTGGCTGGGCAAGCGCAGTGGTGTGGCGATTCTCGACGGTGGCCTGAAGGCCTGGCACGCAGCGAGCCTGCCGTTGAGCCTGGACCCTCCACCCAAACGTGAGGGCACT  <  NC_002947/5840342‑5840196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.